Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00939 ATGGACCACAGTGCCGATGCACATCGCACGGACTTGATGACCATAACGCGCTTCGTGTTGAACGAGCAATCCAAGCACCCTGAGTCACGCGGTGATTTCACCATCCTTCTAAGTCACATTGTGCTTGGTTGCAAGTTCGTTTGCACCGCCGTTAACAAGGCTGGACTTGCGAAGCTTATTGGACTCGCTGGAGAGACCAATATTCAGGGTGAAGAACAGAAGAAACTAGATGTTCTTTCCAATGAGGTTTTCATTAAGGCTCTCGTAAGCAGTGGCCGAACCTGTATATTGGTTTCTGAGGAAAACGAAGACGCGATAATTGTGGAGCCTTCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCCTTGGATGGCTCGTCAAACATTGATTGTGGGGTTTCCATTGGCACAATTTTTGGAATTTATACGTTAGCAGATGTCCATGAACCAACTGTAGAGGATGTCCTGCTTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGTACTGGAGCTGGTGTTAACGGTTTCACCCTTGACCCATCTCTTGGTGAATTCATCCTAACTCACCCTGACATTAAGATCCCAAACAAAGGAAAGATTTATTCAGTAAATGAAGGAAATGCCAAAAACTGGGATGGTCCTACTGCAGCTTACGTTGAAAAATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTTTACGGAGGCATCTTTTTGTATCCTGGTGATAAGAAAAATCCTAACGGAAAACTTCGTGTTCTGTATGAAGTCTTCCCAATGTCATTTTTGATGGAACAGGCCGGAGGACAGTCTTTCACGGGCAAGGAACGGGCACTTGATTTGGTTCCAACGAAGTTGCACGAGCGATCTCCCATTTTCCTTGGTAGCTATGATGATGTTGAGGAAATCAAAACGCTTTATGCTGCTGAGGGTCAAGAAGAATGA 1026 0.4464 MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCTAVNKAGLAKLIGLAGETNIQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEENEDAIIVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTVEDVLLPGKKMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPDIKIPNKGKIYSVNEGNAKNWDGPTAAYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKLHERSPIFLGSYDDVEEIKTLYAAEGQEE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00939 341 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
Phco5g00939 341 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Phco5g00939 341 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Phco5g00939 341 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Phco5g00939 341 Gene3D - 4 203 - -
Phco5g00939 341 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Phco5g00939 341 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Phco5g00939 341 SUPERFAMILY Carbohydrate phosphatase 8 333 - -
Phco5g00939 341 Gene3D - 204 341 - -
Phco5g00939 341 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 335 IPR000146 GO:0005975|GO:0016791
Phco5g00939 341 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Phco5g00939 341 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Phco5g00939 341 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Phco5g00939 341 PIRSF FBPtase 9 339 IPR028343 GO:0042132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00939 Phco-Chr5 14189647 14196121 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00939 5 14189647 14196121 Phco5g00939 5 14189647 14196121 ECH
Phco5g00939 5 14189647 14196121 Phco6g02380 6 45057359 45061034 PCT