Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00744 ATGGAGACTCAAAAGCTAATTATACATCTCATTCTTCTCCTTTGCATTCCTCGTTCATTCTCTTTCACTCCCATAGATAACTACCTTCTTAGCTGTGGATCACAGAACAATGCTTCTCTCTTCAACCGCATCTTCACGGGTGATTCCTCCAACCAAGGCTCAAGTTTTCTCTCTGGTGACAAATCCATTTCCCTCACCAACCAAAACCCTCCTCCAGATTTGCCGATTTTGTATCACACTGCAAGAGTTTTCCCCAGCACAGGAAGCTACAGGTTCAACATGAAGAAGCATGGCACCCACTTGGTTCGTTTTCATTTCTTACCTTTCAAGGCTCAAGGGTTTGATCTAAAATCTGCTAACTTCAGTGTCTTGGTTGATGGTAATTTGGTGCTTAGAAATTTCAAGCCAAGTAATGGTGTGCTGCTTAAGGAGTTTATTCTGAAGATAGAGTCAAATTTGCTTGAAATAGTGTTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTAAATGCTATGGAGGTGTTTACTGCTCCTGTTGATTTTGTTTTAGATTATGGAACTAGGTTGGTTGGTCCTTTTGGTGTGGTAGAGTACAAGAACCTTTCATCTCAGGTTTTGGAAACTGTCCATAGGATTAATGTTGGGGGTGTGAAAGTAACTGCTTTTAATGACACCCTTTGGAGGACATGGATTCCTGATGAGGAATTTCTGGTTTTTAAGGATGCTGCTAAGCCTGTGGTGAGCACTCACACACCAAATTACCAGAAAGGAGGCGCCACTCGGGAGATCGCGCCAGATAGTGTTTATATGACAGCTCAGGAAATGGATAAGGATCACGCCATTATAGCCTCACAGTTCAACATAACCTGGGATTTTCCAGTGGCTCAAGGTGGTGTTCGACACTTGGTTCGGTTGCATTTTTGTGATATTGTTAGTCCTGTTCTTAATTTGCTCTACTTTGATGTGTATATCAACGGGTATTCTGCATACAAGGATCTGGATTTGTCATCTCTTACAGTCCATGTGCTTGCATCTCCGGTCTATGTAGATTTTGTCGCAGATTCTGATGATTCAGGTGTTATTCGAATAAGTGTTGGCCCTTCTGAACTGAGCGGTTCTAGGGGGATGAATGCCATTTTGAATGGGGCAGAGATAATGAAGCTGGTGAATGTTGTGGACTCACGTGTTGTTCCTGGGAAGAAGAGGTGGTGGATATTGGTGGGTTCAATTGCAGGTGGTACTGTTGTTTTGCTTTTAGTTATATCTGCTTTTGTGCTTGCTCTCAAATGCGGGAAGAAGAAGAAGAAGAAGAAACCAAAACAAAGAACACTGGAAAGTGTAGGATGGACGCCTTTACGTGTGTTTGGAGGGAGTTCACTTAGTAGAATGTCTGAAGGAACAGCTTTTCCCTCTCCTGGTTCTTATGGTTATTTTGGATTGAGAATCCCTTTTGCTGATATACAATTAGCCACAAATAATTTTGATAGGAGTCTAATTATAGGATCTGGTGGGTTTGGTATGGTGTACAAAGGAGTGCTCAAAGACAATGTGAAGGTTGCAGTCAAGAGAGGCATGCCTGGATCAAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAATCTTATCCAAAATTCGCCATCGCCATCTTGTTTCACTTGTTGGATATTGTGAAGAAAATTCAGAGATGATACTAGTCTATGAGTATGTTGAAAAGGGTCCACTCAAAAAGCATCTATATGGGTCAGCAGGACATGCACCTTTGTCTTGGAAGCAGCGGCTTGAGATATGCATTGGTGCTGCTAGAGGTCTCCACTATCTACACACCGGTTTCGCGCAAGGAATCATACACCGTGACATCAAATCAACCAATATTTTGCTGGATGAAAACTATGTCGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCAGGACCTTGTCTCGATGAAACCCATGTGAGTACTGGTGTGAAAGGAAGTTTCGGTTATCTTGATCCGGAGTATTTCCGAAGGCAGCAGCTTACGGATAAGTCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTGACAGGGAACAAGTGAACTTAGCCGAATGGGTACTTGAATGGCAGAAAAAAGGAATGCTGGAACATATTATTGATCCTTATCTTGTTGGGAAGATAAAGCAAAGCTCCTTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGATAGGCCAACTATAGGTGCTGTATTGTGGAATTTGGAGTATGCACTTCAACTCCAAGAAAGTGACCAAGAAGAGGAGCCATATGATGATGGCAATGCTCAAGAAACAGTGAATGTGACAACTACAATAACTCCTGGGAGTCCTTCTACCAACATAAGAAGAGAGGGAGATAATGATAATGGTTATTCAGACATAAGTGCCACTGAAGTTTTTTCTCAACTAATGAAGAGTGAAGATCAATCGAACTCATTCAACAACCGCCTATGTATTTCACTTGAAGAATATGAAGAATCTCCTTTTCAGCTTTGGTCTCTCTCATACACAGTCTCTTTGTTGTGTTCCCTCCTTCTAGAATATAATAAATCCACGAGAGAAACCCGAAAATCTTTCTATTCTGGAGAGAAAATTTGGATGGTGAAATTGGAGGGTTTTCCAGGATCCCGAGGCCGAATCTCGGTTCAATTTACGAAGAGGGAGAGGAACAACAACACCCGTTATTGCAGTTGTTGTTGTTGTTGTTGA 2781 0.4186 METQKLIIHLILLLCIPRSFSFTPIDNYLLSCGSQNNASLFNRIFTGDSSNQGSSFLSGDKSISLTNQNPPPDLPILYHTARVFPSTGSYRFNMKKHGTHLVRFHFLPFKAQGFDLKSANFSVLVDGNLVLRNFKPSNGVLLKEFILKIESNLLEIVFRPEGNSGFGFVNAMEVFTAPVDFVLDYGTRLVGPFGVVEYKNLSSQVLETVHRINVGGVKVTAFNDTLWRTWIPDEEFLVFKDAAKPVVSTHTPNYQKGGATREIAPDSVYMTAQEMDKDHAIIASQFNITWDFPVAQGGVRHLVRLHFCDIVSPVLNLLYFDVYINGYSAYKDLDLSSLTVHVLASPVYVDFVADSDDSGVIRISVGPSELSGSRGMNAILNGAEIMKLVNVVDSRVVPGKKRWWILVGSIAGGTVVLLLVISAFVLALKCGKKKKKKKPKQRTLESVGWTPLRVFGGSSLSRMSEGTAFPSPGSYGYFGLRIPFADIQLATNNFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHAPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWVLEWQKKGMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTIGAVLWNLEYALQLQESDQEEEPYDDGNAQETVNVTTTITPGSPSTNIRREGDNDNGYSDISATEVFSQLMKSEDQSNSFNNRLCISLEEYEESPFQLWSLSYTVSLLCSLLLEYNKSTRETRKSFYSGEKIWMVKLEGFPGSRGRISVQFTKRERNNNTRYCSCCCCC 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00744 926 Pfam Malectin-like domain 30 387 IPR024788 -
Phco5g00744 926 FunFam Putative receptor-like protein kinase 27 178 - -
Phco5g00744 926 SMART serkin_6 494 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00744 926 PANTHER OS07G0166700 PROTEIN 481 772 IPR045272 GO:0004714|GO:0006468
Phco5g00744 926 ProSiteProfiles Protein kinase domain profile. 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00744 926 FunFam Receptor-like protein kinase FERONIA 570 782 - -
Phco5g00744 926 SUPERFAMILY Protein kinase-like (PK-like) 477 763 IPR011009 -
Phco5g00744 926 FunFam receptor-like protein kinase FERONIA 462 569 - -
Phco5g00744 926 Gene3D - 205 389 - -
Phco5g00744 926 Gene3D - 27 180 - -
Phco5g00744 926 CDD STKc_IRAK 500 766 - -
Phco5g00744 926 Gene3D Phosphorylase Kinase; domain 1 474 569 - -
Phco5g00744 926 Pfam Protein tyrosine and serine/threonine kinase 499 757 IPR001245 GO:0004672|GO:0006468
Phco5g00744 926 Gene3D Transferase(Phosphotransferase) domain 1 570 793 - -
Phco5g00744 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Phco5g00744 926 MobiDBLite consensus disorder prediction 793 812 - -
Phco5g00744 926 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Phco5g00744 926 FunFam Receptor-like protein kinase FERONIA 205 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00744 Phco-Chr5 8373817 8380531 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco5g00744 Malectin_like 7.4e-32 CL0202