Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00587 ATGCCATCCCGACAACTCTCCACCTCAACAGACACACCGCCACGTCATCACCACCACCACCACTTTTTCATTCCTCTCATCGCCGCCACTGTCTCCACCCTCACACTCCTCCTTTTTCTCCTCTTCCTCCTCTGCCACCGCATCCTCACGCGCAAACGTGCCACCCACCCTCCTCCTCCTCCTTCCTCCTCCCCCCCGCACCGCCTCTCCTTTTCCGTCCTCCGCCGCGCCACCAATTCCTTCTCCTCCCGCCTCGGCCATGGCGGCTTCGGCCCTGTATTCTCCGGCACTCTCGCCGGAGTCCCCGTCGCCGTCAAGCTCATGGACTCCGCCTCCTCCCAGCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCCTCCAAGCTACTCTCTCGCCATGTCATCACCGCCACGCACTTCTCCTCTGACCCCAAACGACGCCGCTTCCTCTTGGTCTACGAGCTCATGCAAAACGGTAACCTCCAAGACGCGCTTTTGCACCGCAAGTGCCCCGAACTATCAAACTGGAACACCCGCTTCTCGATTATTCTCAACATAGCCAAAGGAATTCACTTTCTCCACTCCTGTGACCCCCCTGTTATCCACGGCGACATAAAGCCGAGTAACGTTTTGCTTGATCGCGATTTCTCGCCCAGAATTGGCGATTTTGGGTTGGCGAGGTTGAGCTCGGAGCCTCCGAGGTTTGAAATTGAGGTTCTGGAGTGTGGTAGTGTTAATAATGATGAAGAGAAGAAGAAGATGAAGGAGGAGGAGGTTGACGATTGCGGATCGGTGGCGAGTACTCACAGTGTTTTTATGGAAGAAGGTAGCTTGGGGGTGGAGCAATCTCCTTCGCCAGAGACTGCGGTGATGATGGCCATGACTTCGCCAGAGACGGGTTTAGCTGTGGCAGCGGCGTCGCCGGGGTTTGAGAAGGACGACGCCAAGAAGATGAATGGGAAAGGGTTGAAGAGTAATTCGGTGAGGGATTGGTGGTGGAAGCATGAGAATGATGTTGGGAGTGGGGAGAGTAAGAAGGTTAAGGATTATGTGATGGAGTGGATTGGGAGGGATGTGAATAAGGAAAGGGTGAAGGGTGGAATTGAGTATGGGGATGTGGAGATGGGGAAGGAAGAGGCTAAGAAGAAGAAGAAGAAGAAGAGAAGGGGGAAGGAATTGGAATGGTGGGAGTCAATGGAAGAGGAGAAGTTTGATGGGGTGAAGGGGAAGAGAAGGACCGTGAGGGAGTGGTGGAAAGATGAGTGCTTTGAGGAGAATGAAAATAAGAATAAGAAGAAGAAGAAGAAGAGGAAGGGTGGGGGTGTAAAGAGTGATGATATTGAGAATGGTGATGATTGGTGGGTGAGTGATGATGCATTGGATAAGAGGAAGGGCAAGAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGGTGGATGGATGGTTTGAGTGGTGAGTTATGGAGAGGAAGGAGGAATAATAGCTTTGATTCTGCTAGTGGGGAGATTCCAAAGAGTGGTGGTGTTAGCAGTACTCCTAGTATGAGGGGAACTGTGTGTTATGTTGCTCCTGAGTGTGGCTATGGTGGGGATGTGACTGAGAAGTGTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATAATTTCTGGGCGGCGCCCACTTCAAGTGAGTGGTTCGCCCTTGTCTGAGTTTCAGAGAGCGAATCTACTTTCCAGGGCGCGCCATTGTGCACGAAATGGGAAGCTTTTTGAGTTGGTTGATGAGTCTTTGCAGTTGTTGGATAAGGAGCAGGCTCTTCTCTGCATCAAGGTGGCTTTGCTTTGTTTGCTGAAGTCACCTGCTCGTCGTCCTTCATTGAAGGAGGTTGTGGGAATGCTTAGTGGGGAGTTGGAATCACCCCAATTGCCTGTTGAATACTCTCCTTCAACCCCTTCTCGCTACCCTTTCAAATCTAGGAGAAAAGGCAGTTTTCTTCCTAGGTTGAAGAGCCATGCTGGTAATACCAGAATGTTGGAATTTGAAATGGTTAAATTCTTTGAAGCTGAATCTTTCTATAAGCTTTTCTCATTTGGTGGAGATAACAAAGGGGTTAGGGCAGTCGACAGTGAATTTCATGTGGTGTTGAAAGGGGATGAGCAAGGGTTAGAGTGGGTTCGAGGAGAGAGTGAAAGGGAGAGGAATATTGGTGAGGTAGCGGGTGGATTAGAGAGAGATGTTAAGAGTGTGGAGGGGTTTGTGAGAGGGTTTATGAAAGGGGAAACATTGAGAAAGATGGTGAGAGCAATTATGGAATGGGAAGACGAAAAGGAAGTAAGAAGAAAGGTGGGGGAGCTCGGTGAGATGACACATAAGGCCTTGGAAGATGGTGGTTCATCACAGCTCACCTTAGACTCACAGCTTCAGAGGAAAATCATACACCTAAAGTTGTGA 2436 0.5049 MPSRQLSTSTDTPPRHHHHHHFFIPLIAATVSTLTLLLFLLFLLCHRILTRKRATHPPPPPSSSPPHRLSFSVLRRATNSFSSRLGHGGFGPVFSGTLAGVPVAVKLMDSASSQQGEREFHNELFFASKLLSRHVITATHFSSDPKRRRFLLVYELMQNGNLQDALLHRKCPELSNWNTRFSIILNIAKGIHFLHSCDPPVIHGDIKPSNVLLDRDFSPRIGDFGLARLSSEPPRFEIEVLECGSVNNDEEKKKMKEEEVDDCGSVASTHSVFMEEGSLGVEQSPSPETAVMMAMTSPETGLAVAAASPGFEKDDAKKMNGKGLKSNSVRDWWWKHENDVGSGESKKVKDYVMEWIGRDVNKERVKGGIEYGDVEMGKEEAKKKKKKKRRGKELEWWESMEEEKFDGVKGKRRTVREWWKDECFEENENKNKKKKKKRKGGGVKSDDIENGDDWWVSDDALDKRKGKSRSRNNRGNMDWWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPECGYGGDVTEKCDVYSFGVLLLVIISGRRPLQVSGSPLSEFQRANLLSRARHCARNGKLFELVDESLQLLDKEQALLCIKVALLCLLKSPARRPSLKEVVGMLSGELESPQLPVEYSPSTPSRYPFKSRRKGSFLPRLKSHAGNTRMLEFEMVKFFEAESFYKLFSFGGDNKGVRAVDSEFHVVLKGDEQGLEWVRGESERERNIGEVAGGLERDVKSVEGFVRGFMKGETLRKMVRAIMEWEDEKEVRRKVGELGEMTHKALEDGGSSQLTLDSQLQRKIIHLKL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00587 811 Pfam Protein kinase domain 83 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00587 811 SUPERFAMILY Protein kinase-like (PK-like) 56 650 IPR011009 -
Phco5g00587 811 ProSiteProfiles Protein kinase domain profile. 79 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00587 811 Gene3D Glycogen Phosphorylase B; 787 798 - -
Phco5g00587 811 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 743 800 - -
Phco5g00587 811 PANTHER OS07G0586332 PROTEIN 1 656 IPR044576 -
Phco5g00587 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Phco5g00587 811 Gene3D Phosphorylase Kinase; domain 1 57 156 - -
Phco5g00587 811 Gene3D Transferase(Phosphotransferase) domain 1 157 267 - -
Phco5g00587 811 Gene3D Transferase(Phosphotransferase) domain 1 496 637 - -
Phco5g00587 811 SMART serkin_6 79 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00587 811 Pfam Protein tyrosine and serine/threonine kinase 514 626 IPR001245 GO:0004672|GO:0006468
Phco5g00587 811 Gene3D Glycogen Phosphorylase B; 748 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00587 Phco-Chr5 5585658 5592274 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Phco5g00587 Pkinase 9.3e-24 CL0016