Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00577 ATGATGAAGCAGGTTCTTCTTTTGTTCTCCTTTGCCTCTGCTCTAACCCTTTCAGTAACAGAGTCCAAATCTGATTCTCTTCAAGGTCTTGCTGATTCCTTCTCTTTTGGCTATATTCAGACGAAGACCCCAGCGAACTGTTCTTACCTTGTAAATATATCTACAAGTTGTTCCTCACCCAAGTTCACATGGGAGAAGATCGGAATTGCTTTTGGAGATGCTTATGGCAACAAGGTAAACAAAACAAGATTAGACGGTCCAGTTTCAAGGACATTCGAGCAATGTTCTTTTGATGTATTTGAGATAAATGGGGCATGTGTATCTCATATTTGTTATGTGTACCTATATAGATCTGGTGCAGTGGATGATTGGAAACCTGAAACAGTGAAAATCTATTGCAACAACACATGGTTTCTCACTTACAATTTACACTTCTCCCTCCCTGATGCTACCTGGTATGGCTATGATTGGTGTGATGATATTCCTCCACGCCACCTATATCCTGAGAAATGGCTTTCCCTTCAGAAATGGGTTGTTTTTCTGAGGCGATGGTAA 555 0.4072 MMKQVLLLFSFASALTLSVTESKSDSLQGLADSFSFGYIQTKTPANCSYLVNISTSCSSPKFTWEKIGIAFGDAYGNKVNKTRLDGPVSRTFEQCSFDVFEINGACVSHICYVYLYRSGAVDDWKPETVKIYCNNTWFLTYNLHFSLPDATWYGYDWCDDIPPRHLYPEKWLSLQKWVVFLRRW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00577 184 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 154 IPR036392 GO:0005515
Phco5g00577 184 Gene3D PLAT/LH2 domain 47 148 - -
Phco5g00577 184 Pfam Embryo-specific protein 3, (ATS3) 40 158 IPR010417 -
Phco5g00577 184 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 6 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00577 Phco-Chr5 5453807 5454999 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02593 6 47593035 47595960 Phco5g00577 5 5453807 5454999 PCT