Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00390 ATGAGTAGCAGTGGGACAGCAGGGCCTGGAAATTCGTTCTGGGACTTAAATGCCAGATCTCGATGGCAATTGGCAATTGGGTGGCTTTGGATCGGTGATTGGGAAAATCTCGAGAAGCTTTGGTGTTTGCGGTATTTTCTGGGAACATCTCTCCTAGGTTTCGTTGTTTTCAAGGAACAAAAAAAGTTGACAAATTTATCGGCTTTGATTGCCGAGGGTTTTTTGTTCTGGAGGAAACAAGCACTTATGCTTCCGGTTGGCAGGGGCTTGAGAATGGCAGACACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAGGAGGAATAGGTTCACCCGAGCTGAGGCGGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCTTGCAGAAGCTTACATTGGAAGAAAAGGACTTGCGTGGCGGGTTGCAGAATGATAAGGGGAAGCCTGTAGTAGAAAATCATGGGTTGGATTCTCGTGACGGTGTTGAAGTTTTTAAAGAACTGATTGTGAAGGAAATAGAATGTGGGACTGGTAGAAATGCTGCAGAAGAAAGCAAATGGAAAACTGTTACTCCCACAGGGGAAAGGAATAAGTCTAGTGAAGTGGTTGGGACGAGTGAAAAAAACTTTACTTTCTCAAAGAGTTCGGAGGACAGTGTTCTTGATTTGTACTCGTGGAAGTTTAATCCCTGCAATGGTCCTGTGGATCCTTACCAAAACGAAAGTGGAAGTAGGCCGAGTAATGCTTTGAAGGCCCCAGTATCTCAACAATCAAAGTATCAAACTGGTGAAGCTCCTGATGCCACTAACAGTAATGTGAAATCTGGGGAGGCAAATAATGTACCTGCTGAAAAAACAACTTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCGAAGTATGACCTTATGCCTAATAAAGAACCTAAGGAACATGATCTGCAGCTCAAATTTAATGCTTCATCTCTTAAAGAGAACTTGACAGATAATCACTTGTCAAGAACTGATGAGAATGTGAGTTCATCTACAGATCTATGGAAAGATTGTTCTGTGAAGACTGTTTTCCCTTTCTCAAAGGGAGATATGTCTACAAGCTACAAAGGTTCAACTTATTCTGACAGACAAGAGGAGAAGAGAAGGGCAGAAAATGGTGATGTTATGACGTCAATAAAAGAGCAAGTGGATGAAGTAGGAAGAGCTCTTTACTTAGGAAAGTTTCAAGGAAGTTCTGGCAGCTTAAATTTTCCTCTTGCACTGGAAAATCCAAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAGCCCTTGACTTTTAATTGGGGAGATAAGTTTGAGTCTGACGGACTGGCTGCGAAACTCGCTGGTGCTGACAACTCCTTACTTATCGGGTCATATTTGGATGTCCCTATTGGACAAGAGATTAAAACTACAGGTGTGAGGAAGGCTATAGGGGGCAGTTGGCTGTCGGTAAGTCAAGGGATTTCAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGGGATGGGTTGAGTGAATCTCTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGAAGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACACGAAATTGATTACCCCAGTGACAATGAAAAGGGGACGGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGGGGTCCAGCCAAAGATGAAGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCCGGTGAGCAATATATTCTACCAAAAAATGTTGAGCCAGTCATTTCAGATGATCCTATTGGTCTAACAATTACTGAAATGTATGGAAGAACCAATGGTAACGATGTAATGACTCAATATGATACACAACTGATGGATGTTGAAGAACTGAATCTGATGCATATAGAACCTGTCAGGCAGGGCTTTGTCACTCACCAAAATGATTTCATCATGCTGGGAGATGGGCAGGTTCTGAATCATAGTGCGAGGCCACGAATTGAGGACATGGAAGATGATCAGCACGGTTCAGTTAGATCAATTGGAGTGGGGATCAACAGTGATGCTGCTGATATTGGTAGTGAAGTGCATGGAAGTTTGATTGGTGGTAGTAGTGAGGGGGATTTAGAATATTTTCGTGATCATGATACTGTGCGCAGTAGCTCCAAACACACTCATCAGGATTTGGACAAGAGTTCTTTTAATAAATCAGTAAAAAATAACAAGAAAAATGACAAGAATGAATCAAATAAGTATGTCATAGACAGTGATAAAGATGCATGCTCGCAGATAAAAACACATACTGATGGGAACTTTTCATTCCCCCAATCTCTTAGAGATGGCCAGATGATTTCGGCTGGCTCCAGTAAGTCCCTATTTTCGAGTAATTGTAATGTAGATGAAACAGAAGACTGTCTTAATGCCTTTGTGGGCTCTGATGACATGCTTTCTTCTTGGAGGCGGAAGAGTAGTGATTCTTCGCCTGTTAAAAGTTCTAGGGATGATAATAATGCTATTGTGGTAAGATCCAGAAACTCTTCTCCAACTACGGTCTCAAATTATGGGTATACTGATGGAGAGCATGTCAAGCTAGAAAAGGATGAAAAGATAAGTGTGGTAAGGGAAGATGATATAGGTGCATCACTAGAGGATGAGGAGGCAGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAAGAGGAAGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTAATAGCTGGGCGCTATCATGTCACCGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCACGACCTGCACACAGGCATGGATGTTTGTGTTAAGATTATAAAGAACAACAAAGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTTCCACCTTCTAAGATTGTATGATTATTTCTATTATAGAGAACACTTGTTAATAGTATGTGAACTGCTTAAAGCCAACTTATATGAGTTTCACAAATTTAATCGAGAATCAGGGGGGGAAGTTTATTTCACGATGCCAAGGTTGCAGTCCATCACCATTCAGTGTTTGGAGGCACTTCAGTTTTTGCACAGTCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAAGTGAAGGTTATTGATCTCGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTTCAAAATGATTCCCCTGCAACATTACTTGCTCGGGTGATCGGGATCATTGGCCCAGTTGATCAAAGTTTACTTGCCAAAGGACGGGATACATATAAATACTTCACAAAAAATCATATGCTTTATGAACGAAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACCTCATTGAGGCATAGATTACCGATGGGAGACCAAGGCTTCATCGACTTTGTTGCTCATTTGCTCGAGGTTAACCCAAAGAAGCGACCTTCTGCATCTGAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTAA 3810 0.4152 MSSSGTAGPGNSFWDLNARSRWQLAIGWLWIGDWENLEKLWCLRYFLGTSLLGFVVFKEQKKLTNLSALIAEGFLFWRKQALMLPVGRGLRMADTNSVEVILDFLRRNRFTRAEAALRSELSNCSDVNGFLQKLTLEEKDLRGGLQNDKGKPVVENHGLDSRDGVEVFKELIVKEIECGTGRNAAEESKWKTVTPTGERNKSSEVVGTSEKNFTFSKSSEDSVLDLYSWKFNPCNGPVDPYQNESGSRPSNALKAPVSQQSKYQTGEAPDATNSNVKSGEANNVPAEKTTLWLGSSGKASTEPKYDLMPNKEPKEHDLQLKFNASSLKENLTDNHLSRTDENVSSSTDLWKDCSVKTVFPFSKGDMSTSYKGSTYSDRQEEKRRAENGDVMTSIKEQVDEVGRALYLGKFQGSSGSLNFPLALENPKEEFPRLPPVKIKSEDKPLTFNWGDKFESDGLAAKLAGADNSLLIGSYLDVPIGQEIKTTGVRKAIGGSWLSVSQGISEDTSDLVSGFATIGDGLSESLDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEEDDQSFAEEDSYFSGEQYILPKNVEPVISDDPIGLTITEMYGRTNGNDVMTQYDTQLMDVEELNLMHIEPVRQGFVTHQNDFIMLGDGQVLNHSARPRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLIGGSSEGDLEYFRDHDTVRSSSKHTHQDLDKSSFNKSVKNNKKNDKNESNKYVIDSDKDACSQIKTHTDGNFSFPQSLRDGQMISAGSSKSLFSSNCNVDETEDCLNAFVGSDDMLSSWRRKSSDSSPVKSSRDDNNAIVVRSRNSSPTTVSNYGYTDGEHVKLEKDEKISVVREDDIGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKFHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPVDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00390 1269 Coils Coil 910 930 - -
Phco5g00390 1269 MobiDBLite consensus disorder prediction 238 297 - -
Phco5g00390 1269 Gene3D Phosphorylase Kinase; domain 1 952 1039 - -
Phco5g00390 1269 SMART serkin_6 958 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00390 1269 MobiDBLite consensus disorder prediction 238 310 - -
Phco5g00390 1269 Pfam Protein kinase domain 958 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00390 1269 MobiDBLite consensus disorder prediction 837 878 - -
Phco5g00390 1269 Gene3D Transferase(Phosphotransferase) domain 1 1012 1260 - -
Phco5g00390 1269 ProSiteProfiles Protein kinase domain profile. 958 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00390 1269 MobiDBLite consensus disorder prediction 737 774 - -
Phco5g00390 1269 SUPERFAMILY Protein kinase-like (PK-like) 947 1262 IPR011009 -
Phco5g00390 1269 FunFam Putative serine/threonine-protein kinase dyrk2 952 1039 - -
Phco5g00390 1269 MobiDBLite consensus disorder prediction 841 876 - -
Phco5g00390 1269 FunFam Serine/threonine-protein kinase ppk15 1037 1261 - -
Phco5g00390 1269 MobiDBLite consensus disorder prediction 566 596 - -
Phco5g00390 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1084 1096 IPR008271 GO:0004672|GO:0006468
Phco5g00390 1269 PANTHER DUAL SPECIFICITY PROTEIN KINASE 559 1260 - -
Phco5g00390 1269 CDD PKc_DYRK_like 958 1260 - -
Phco5g00390 1269 MobiDBLite consensus disorder prediction 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00390 Phco-Chr5 3482332 3489833 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Phco5g00390 Pkinase 1.3e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03758 4 56904147 56915114 Phco5g00390 5 3482332 3489833 PCT