Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00381 ATGGATGGTGATAATGGTCTTAACATCCGCAATTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGGGCATTTCACCACAGGGACATTGGTATGTCCCAAACTACATACCCTATGGAATACATGAGGGATGCTTGGATCAGTAGTCAGAGAGAGAAGTACATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACTTCTTCGGCACATCAAATTCAAATGATTCCACCACCGGAATTGCCGAAGGAAGAAAGGGCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAAGTGGGGGCGCTCGTAAGAAAAGACAGAGCCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAAAATGCTCCCACAGTTCAACGTGCAAGGGTTCCCAAGAAAACTACTGAAATTGTAATAAATGGAATTGACATGGATATTTCTAGTATTCCAATTCCTGTTTGTTCATGCACTGGAGCTCCTCAACAGTGTTACAGATGGGGCTCTGGTGGTTGGCAATCTGCATGTTGCACAACAGGTATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAAGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTGACTATTAGGTAG 852 0.4554 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGMSQTTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERAVEEEPVVEKASGGARKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00381 283 MobiDBLite consensus disorder prediction 135 154 - -
Phco5g00381 283 SMART GAGA_bind_2 1 283 IPR010409 -
Phco5g00381 283 PANTHER - 1 283 IPR010409 -
Phco5g00381 283 MobiDBLite consensus disorder prediction 114 134 - -
Phco5g00381 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Phco5g00381 283 MobiDBLite consensus disorder prediction 114 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00381 Phco-Chr5 3423860 3424711 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phco5g00381 GAGA_bind 9.3e-111 No_clan