Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00379 ATGGATGGTGATAATGGTCTTAACATCCGTAATTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCGTCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGGGCATTTCACCCCAGGGACATTGGTATGTCCCAAACTACATACCCTATGGAATACATGAGGGATGCTTGGATCAGTAGTCAGAGAGAGAAGTACATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACTTCTTCGGCACATCAAATTCAAATGATTCCACCACCGGAATTGCCAAAGGAAGAAAGGGCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAAGTGGGGGCACTCGTAAGAAAAGACAGAGCCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAAAATGCTCCCACAGTTCAACGTGCAAGGGTTCCCAAGAAAACTACTGAAATTGTAATAAATGGAATTGACATGGATATTTCTAGTATTCCAATTCCTGTTTGTTCATGCACTGGAGCTCCTCAACAGTGTTACAGATGGGGCTCTGGTGGTTGGCAATCTGCATGTTGCACAACAGGTATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGAGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAAGGTTATAACTTTTCTAATCCCATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTGACTATTAGGTAG 852 0.4542 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHPRDIGMSQTTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERAVEEEPVVEKASGGTRKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00379 283 MobiDBLite consensus disorder prediction 135 154 - -
Phco5g00379 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Phco5g00379 283 MobiDBLite consensus disorder prediction 113 170 - -
Phco5g00379 283 SMART GAGA_bind_2 1 283 IPR010409 -
Phco5g00379 283 MobiDBLite consensus disorder prediction 114 134 - -
Phco5g00379 283 PANTHER - 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00379 Phco-Chr5 3346282 3347133 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phco5g00379 GAGA_bind 1.3e-110 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00379 5 3346282 3347133 Phco5g00379 5 3346282 3347133 ECH