Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00360 ATGGCACTAGTCCGCCACCGCCGACAACCCAATCTCCGCCTCCCTCTCCCGGAGTCCTCAGAGCGCCGACCCCGCTTCCCGCTCCCCCTCCCTCCCGCCGCCGCCAAACCCGCCGGCGGAGACGCTATCACCGCCGCCGACCTCGAGAACCTCGCCGTGCTCGGCCACGGCAACGGCGGCACAGTCTACAAGGTCCGCCACAAGACCACCTCCGCCACCTACGCGCTCAAAATCATCCACAGCAACGCCGACGCTACCACGCGCCGCCGCGCGTTCGCGGAAAGCTCCATCCTCCGCCGCGCCACCGACTGCCCCCACGTCGTCCGCTTCCACGGCTGCTTCGAAAAGCCCTCCGGCGACGTGGCCATCGTCATGGAGTACATGGACGGCGGCTCCCTCGAAACTGCGCTCACCACCGGCGGCACGTTCTCCGAGAAGCGACTCGCCGCAGTGGCGCGTGATATCCTGGAGGGCCTCGCGTGCCTCCACGCGCGCAACATCGCGCACCGCGACATCAAACCTGCGAACATCCTCGTAAACTCACAGGGAGAAGTTAAGATTGCAGACTTTGGAGTCAGTAAACTCATGTGTCGTGCGCTCGAAGCGTGCAAGTCCTATGTTGGCACGTGCGCCTACATGAGTCCCGAACGGTTCGACCCGGAAGCATCTGGCGGCAACTACAATGGTTTTGCGGCGGACATATGGAGTCTGGGTTTGACCCTTTTTGAACTCTACGTGGGTCACTTCCCTTTTCTAGAAACGGGTCAACGACCCGATTGGGCTACCCTTATATGTGCCATTTGCTACGGCGACCCGCCGAGCCTCCCCGAGACGGCGTCAGCGGAGTTTCGCAGCTTCGTCGAGTCATGCCTCAAGAAGGAGTCCGGTGATAGGTGGACGGCGGCGCAACTCTTGACCCACCCGTTTGTGTGCAAGGACCCGGAAACTCACTAA 954 0.6258 MALVRHRRQPNLRLPLPESSERRPRFPLPLPPAAAKPAGGDAITAADLENLAVLGHGNGGTVYKVRHKTTSATYALKIIHSNADATTRRRAFAESSILRRATDCPHVVRFHGCFEKPSGDVAIVMEYMDGGSLETALTTGGTFSEKRLAAVARDILEGLACLHARNIAHRDIKPANILVNSQGEVKIADFGVSKLMCRALEACKSYVGTCAYMSPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLETGQRPDWATLICAICYGDPPSLPETASAEFRSFVESCLKKESGDRWTAAQLLTHPFVCKDPETH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00360 317 Gene3D Transferase(Phosphotransferase) domain 1 125 317 - -
Phco5g00360 317 SMART serkin_6 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00360 317 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Phco5g00360 317 Gene3D Phosphorylase Kinase; domain 1 34 124 - -
Phco5g00360 317 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00360 317 FunFam Mitogen-activated protein kinase 2 130 317 - -
Phco5g00360 317 ProSiteProfiles Protein kinase domain profile. 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00360 317 MobiDBLite consensus disorder prediction 1 34 - -
Phco5g00360 317 CDD PKc_MAPKK_plant_like 46 310 - -
Phco5g00360 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Phco5g00360 317 SUPERFAMILY Protein kinase-like (PK-like) 47 312 IPR011009 -
Phco5g00360 317 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 42 311 - -
Phco5g00360 317 FunFam Dual specificity mitogen-activated protein kinase kinase 36 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00360 Phco-Chr5 3170389 3171342 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco5g00360 Pkinase 9.4e-64 CL0016