Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00359 ATGGCTCTCATTCGCCACCACCCTCGTTACCCTAACCTCCGTCTTCCCCTCTTAGACCTCTCCGAGCGCCGCTCCATTTTCCCTCTCCCCGCCACCACCACCAAATCTGTCAGTGACAATGCCATTAACATTGGTGACCTTGAGAAGCTCCTTATTCTTGGTCATGGTAATGGTGGCATGGTCTACAAAGTTTGCCATAAAGACACTTCTGCAACCTATGCACTGAAGATTATCCGCAGCAATGTTCATCGTGCACTTTCAGAAGTCTCAATCCTTCGTCATGCCACTGACTGCCCCTATGTGGTTGGCTTCCATGGCTCTTTCGAGAACTCCAATGGCGAAATGGCGATACTCATGGAGTACATGGACAATGGCAGCCTTGAAACTGCCCTAGCCACCAATGGCACTTTCTCCGAAGAGAGACTTGTCGTAGTGGCGCGTGACATCCTCAATGGTCTTGCGTACCTCCATGCACGCAACATCATTCATCGTGACATTAAGCCTGCAAACATCCTCGTAAACACGAAAGGCGAGGTGAAGATTGCTGACTTTGGAGTTAGCAAAGTCGTGAGTCACACATTCGAGATGTGTAACTCTTATGTTGGCACAAACGCGTACATGAGTCCTGAACGGTTCAACCCAGATGCGTATGGAGGGAGCTATGATGGTTTTGCTGGTGATGTATGGAGTTTTGGTTTGACCCTCTTTGAACTCTATGTGGGTCACTTACCATTTCTCGAAGGTGGTGAAAGACTCAACTGGGCCACCCTTGTGTGTGCCATTTGCTTCAATGAGCCACCAAGCTTGCCTGAGACTGCATCAGTAGAGTTTCGCAACTTCATGGCGTGTTGCCTGAAGAAGGAGCCCAGCGAGAGGTGGACGACAACTCAACTCTTAACTCATCCATTTATAAGCAAAGACCTAAGAAGCTATTAG 936 0.4882 MALIRHHPRYPNLRLPLLDLSERRSIFPLPATTTKSVSDNAINIGDLEKLLILGHGNGGMVYKVCHKDTSATYALKIIRSNVHRALSEVSILRHATDCPYVVGFHGSFENSNGEMAILMEYMDNGSLETALATNGTFSEERLVVVARDILNGLAYLHARNIIHRDIKPANILVNTKGEVKIADFGVSKVVSHTFEMCNSYVGTNAYMSPERFNPDAYGGSYDGFAGDVWSFGLTLFELYVGHLPFLEGGERLNWATLVCAICFNEPPSLPETASVEFRNFMACCLKKEPSERWTTTQLLTHPFISKDLRSY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00359 311 FunFam Mitogen-activated protein kinase 2 124 310 - -
Phco5g00359 311 ProSiteProfiles Protein kinase domain profile. 47 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00359 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Phco5g00359 311 SUPERFAMILY Protein kinase-like (PK-like) 36 307 IPR011009 -
Phco5g00359 311 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Phco5g00359 311 PRINTS Tyrosine kinase catalytic domain signature 226 248 IPR001245 GO:0004672|GO:0006468
Phco5g00359 311 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Phco5g00359 311 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Phco5g00359 311 Pfam Protein kinase domain 50 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00359 311 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Phco5g00359 311 Gene3D Transferase(Phosphotransferase) domain 1 125 310 - -
Phco5g00359 311 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 41 306 - -
Phco5g00359 311 SMART serkin_6 47 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00359 311 CDD PKc_MAPKK_plant_like 46 306 - -
Phco5g00359 311 Gene3D Phosphorylase Kinase; domain 1 21 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00359 Phco-Chr5 3163585 3164520 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco5g00359 Pkinase 1.1e-61 CL0016