Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00263 ATGATCACTTGTAGTCTCCATCTATTCCTCCTCTTCTCTTTAACTGAAACACTCATTCTTCCAGGTAGCAGTAACAGTAACACTTGGTCTGTGTTTCAGGGTGTAAAGCTCTTATGGACAAGAAATAAAACAGTGGATAAAGGCAATAATGGGGGCCACCTTAAACTGCACAATCTCTTCATGGCGTGCGAGGATAGGAAAAATTGCAGCAGTATCACACAGTCACCGGGAAGTGATGAATTTGCTAAGGACACACTTGTGAATTATACCAGTCTAAATTTATCAGTTGCTGAACTCAATGTTCATCGTGTGTTAATTACCAGAAACCCGGGTGATAGTGAAGCTTTTCCACTACCTCGTGTGATAAGTAATGAGACCTTACCTTATGCATCACGCAGAAATGGTAAACACCTATTTTGGAAAAGCAAAGTCATTATAGGTGTTACAAGTGTTGGTGTGGTAATGGGAGTATTCACTATATGTATCATAATGTATTGTTTTAGATACAACCTATTCACTCCATTGATGAAATTTTGTTTGACCACAAAGAATGACCAAGATATTGAAGCATTCTTAAAAATTCATGGAGCACAGACACAAAAAAGATACAATTTTGCAGAAGTCAAGAAAATGACCAATTTCCTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGCAGTGTACAAAGGAAAATTACCCACAGGCATCCCTGTGGCTGTAAAATTATTGAATGCATCCAAAAGAAATGGAGAAGAATTTATGAATGAGGTTGCCAGCATTAGTAGAACCTCTCATGTTTTGGATTTTGCTTTGAAGATATCAGATTTTGGGTTAGCAAAGCTCTGTCCTAAAAAAGAAAGCATTATTTCCATGGCGGATACTAGAGGGACAATGGGGTATGTAGCTCCTGAAATGTGCAATAGACAATTTGGTGGAGTTTCACACAAGTCTGATGTCTACAGTTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGAAGAACGTTAATACTGAAACTAGTCATACAAGTGAGATATACTTCCCACATTTGATACACAAGAGGCTTGCGCTGAATAAGGATTTAAGACCTGATGAAGAGATGACCGCAAAAGAAAATGAGATTGCAAAGCGAATGACTATAGTAGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCTACAATGAGTAAAGTAGTGGACATGTTGGAAGACGACATGAATTTCTTAGAAATGCCACCAAAACCTATGTTTTCTTCACCTACAAGATCGACAACAGAATCTTCCTTTTAA 1296 0.3804 MITCSLHLFLLFSLTETLILPGSSNSNTWSVFQGVKLLWTRNKTVDKGNNGGHLKLHNLFMACEDRKNCSSITQSPGSDEFAKDTLVNYTSLNLSVAELNVHRVLITRNPGDSEAFPLPRVISNETLPYASRRNGKHLFWKSKVIIGVTSVGVVMGVFTICIIMYCFRYNLFTPLMKFCLTTKNDQDIEAFLKIHGAQTQKRYNFAEVKKMTNFLKVKLGQGGFGAVYKGKLPTGIPVAVKLLNASKRNGEEFMNEVASISRTSHVLDFALKISDFGLAKLCPKKESIISMADTRGTMGYVAPEMCNRQFGGVSHKSDVYSYGMMLLEMVGGRKNVNTETSHTSEIYFPHLIHKRLALNKDLRPDEEMTAKENEIAKRMTIVGLWCIQTFPNDRPTMSKVVDMLEDDMNFLEMPPKPMFSSPTRSTTESSF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00263 431 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
Phco5g00263 431 Pfam Protein kinase domain 270 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00263 431 PANTHER RUST RESISTANCE KINASE LR10-RELATED 185 266 IPR045874 GO:0004672
Phco5g00263 431 Pfam Protein tyrosine and serine/threonine kinase 216 265 IPR001245 GO:0004672|GO:0006468
Phco5g00263 431 ProSiteProfiles Protein kinase domain profile. 39 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00263 431 Gene3D Phosphorylase Kinase; domain 1 185 262 - -
Phco5g00263 431 SUPERFAMILY Protein kinase-like (PK-like) 217 425 IPR011009 -
Phco5g00263 431 Gene3D Transferase(Phosphotransferase) domain 1 263 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00263 Phco-Chr5 2183445 2192062 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco5g00263 Pkinase 2e-16 CL0016