Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00014 ATGTCGAGGATGACTTCAGAGAAGAAGCTTGGTGCTGGACGTGTGGTGGCTGTGGCCATTGAGAATAACAAGACCAGCCAACACGCTGCCAAGTGGGCAGTGGACATTCTTCTCCCCAAGGACCAATGTCTCTTACTAATCCATGTCAGACAAAGACCATCTTCAGCGAATTCTGCGAACGAAGCTGTGGGCGACAACGAATCCAAGGAACTCTTTGAATCATTTAGAGTTTTCTGCAACAGGAAAAGTATACAATGCAGAGAAGTGTTGTTGGAGGACATGGATATAGCAAAGGCATTAGGAGAAAGCATTATCACGAATTCTATCGAGCTTCTTGTACTTGGAGCGCCATCAAGGGGTGGCCTTGTTAGAAGATTTAGAACAACGGATATTCCAAGCACTGTGTCAAAGGCAGCGCCACCATTCTGCACTGTGTATATAATTTCTAAAGGAAAAATCTCAAGTGTGAGAACAGCTACTGCTCCATTGGCTCCTAAACCTGCTGCAGCACGTAACCAATTGCAGCCACAACAGCCACAGCAACAGCCACGGCCACAGCCACGCCACCAGCCACTGATGCGAAGTCCTGAAAGATTGTTGGAATCTCAGCCAACCCGCAGCACCTACCCACCACGACCTTCATTTGGGAGTGGGACACGCCAGATGGCATTGGATGATGATGATGATATCATATCACCATTCACAAGGGCTGGCAGAACATACGAGTCTTCAAAACTTCCGGATTCTGACATATCATTTGTGAGCAGCGGAAGGCCAAGTATTGATCGAATATTCCCAATGATGTACGACGATTTGGACAGTGCTAGTGGAATGGCCGCGGGTAGGTATTCGTGTGTGTCAGATTCTGACGCCAGAAGCTTCGCTTCTTCATTGTCCTCGCAAGGATACAATAGCAATGATGACTACTCCTTCTCCTCGCAACAAAGGCTATCAGACTGCACGGATGACGTTGAATTGGAGATAAGGAGGCTGAAGCTGGAACTGAAGCAGACGATGGATATGTACAGCTCAGCCTGCAAGGAAGCTATGAATGCAAAGCAGAGGGCAATGGAGGCTCAACGTTTGAAAGCGGAAGAACAGAAGAAATTGGAAGATTCGAAAACGGGTGATGCCTCAACCACACAACTCATGGAGATGGAGCAGGATAGGATCAGAGAAGAAATTGCCGCATTGGAAGCACAGAAGAGAATCAGCCACGTAGAGAGGAGGAAACCAAGTGAAAGCTTCGGCACTGCCATGTACAGAAGGTACAGCATTGAGGAAATTGAAAAGGCAACAAATATGTTTTCGGACTCTGTCAAGATCGGCGAAGGAGGTTATGGTCCAGTCTACAGGGGTGAACTAGATTGCACCCAGGTTGCCATCAAGGTCTTGAAGCCAGATGCAGATCAAGGACGCGAGCAGTTTCAGCAAGAAGTAGAAGTGTTGAGTTGCATAAGGCATCCAAACATGGTTCTGTTGCTGGGGGCATGTCCAGAGTATGGTTGTCTTGTGTATGAGTACATGGCGAATGGAAGCTTGGATGATTGCTTGTTCAGGAAAGGAAGTTCACGTCCACCTCTTCCATGGCAGCTAAGGTTCCAAATTGCCGCAGAGATAGCAACAGGTCTGCTTTTCCTTCACCAGACAAAACCAGAGCCACTGGTACACCGTGACCTAAAACCGGGCAACATTCTCCTTGACCGCAACTACGTGAGCAAGATCAGTGACGTGGGGTTGGCCAGGCTGGTGCCTCCTTCAGTTGCTGACACTGTAACTCAGTATCGCATGACTTCCACTGCTGGAACCTTCTGCTACATCGACCCGGAGTACCAGCAAACAGGCATGCTGGGAATCAAATCTGACATATACTCTCTGGGGATCATGCTTCTGCAATTGGTGACGGCGAAGCCTCCGATGGGTTTGACTCATCATGTTGCGAGATCCATCGAGAAGGGAACTTTTGCTGAGATGCTTGACCCAGCTGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTCGCAAAGCTTTCCCTGGGATGTGCCGAAATGAGGAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTCTTGCCTGAGCTCAATAAGCTCAAGATATTTGCTGAAGAAAGCATGTCACCTATGATGATGTTTGGACTTCGAAGTGGAGGAGGTGGTGGTGCCGGGTATCTTCCAAGAACTAGTAACTCCTCATCCACACATTCTGACACGAGTGAAACATTGTCTGGGTTCTCTGGATATGAAAGGCGCTCAAGCTCATCATCACTGGGGAGAATGTAA 2298 0.4817 MSRMTSEKKLGAGRVVAVAIENNKTSQHAAKWAVDILLPKDQCLLLIHVRQRPSSANSANEAVGDNESKELFESFRVFCNRKSIQCREVLLEDMDIAKALGESIITNSIELLVLGAPSRGGLVRRFRTTDIPSTVSKAAPPFCTVYIISKGKISSVRTATAPLAPKPAAARNQLQPQQPQQQPRPQPRHQPLMRSPERLLESQPTRSTYPPRPSFGSGTRQMALDDDDDIISPFTRAGRTYESSKLPDSDISFVSSGRPSIDRIFPMMYDDLDSASGMAAGRYSCVSDSDARSFASSLSSQGYNSNDDYSFSSQQRLSDCTDDVELEIRRLKLELKQTMDMYSSACKEAMNAKQRAMEAQRLKAEEQKKLEDSKTGDASTTQLMEMEQDRIREEIAALEAQKRISHVERRKPSESFGTAMYRRYSIEEIEKATNMFSDSVKIGEGGYGPVYRGELDCTQVAIKVLKPDADQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRKGSSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVARSIEKGTFAEMLDPAVEDWPVEHALHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLKIFAEESMSPMMMFGLRSGGGGGAGYLPRTSNSSSTHSDTSETLSGFSGYERRSSSSSLGRM 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00014 765 FunFam U-box domain-containing protein 51 509 710 - -
Phco5g00014 765 MobiDBLite consensus disorder prediction 728 765 - -
Phco5g00014 765 Coils Coil 381 401 - -
Phco5g00014 765 SMART serkin_6 436 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00014 765 ProSiteProfiles Protein kinase domain profile. 436 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00014 765 Gene3D HUPs 3 148 IPR014729 -
Phco5g00014 765 SUPERFAMILY Protein kinase-like (PK-like) 415 696 IPR011009 -
Phco5g00014 765 MobiDBLite consensus disorder prediction 730 765 - -
Phco5g00014 765 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 127 - -
Phco5g00014 765 PANTHER OS02G0152300 PROTEIN 15 717 - -
Phco5g00014 765 MobiDBLite consensus disorder prediction 200 215 - -
Phco5g00014 765 Gene3D Phosphorylase Kinase; domain 1 406 508 - -
Phco5g00014 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Phco5g00014 765 Gene3D Transferase(Phosphotransferase) domain 1 509 712 - -
Phco5g00014 765 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 408 508 - -
Phco5g00014 765 CDD STK_N 15 151 - -
Phco5g00014 765 Pfam Protein kinase domain 437 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g00014 765 MobiDBLite consensus disorder prediction 166 226 - -
Phco5g00014 765 Coils Coil 347 369 - -
Phco5g00014 765 Coils Coil 321 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00014 Phco-Chr5 187646 190766 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco5g00014 Pkinase 2.1e-39 CL0016