Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03755 ATGGCATTGGCATTGGCATTGGCATTGGCACTGTACAGTGACTGGACACTGAGTGGAGAAAAGGAAGCAAAGCAAAATGGTTCCCAAAAGATACTGAACCAACCATTATTGTTTTCCGACACATCAATAGTCATTGCAAAGGCAAAGAAAGGTGTTGGGTTATATAGTTTATGCACTCTGCACTTGGAACCACCAAGAGAACCACCAAGAGAGAGAAGAATGGAAGGAGGATCTGCCGAGAAGTGGAAGAGTGTATACAGAGAGTGCTTGAGAAACCATGCAGCCAGCCTCGGAAGCTACGCCACCGACGGCTGCGGGGAGTTCACGCTGGACAGCGGGGGCCTGCAATGCGCGGCGTGCGGCTGCCACCGCAACTTCCACCGGAAAGTGAAGTACCCGGTAGGCCCGGAAAGTCCTGGAGCGATGGATTACGGTGGCGAGGGGGGGAGTAAGAAGCGGTTCAGGTCGAAGTTCAGCGCAGATCAGAAGGAGAAGATGCTGGCGTTTGCTGAGAAGCTTGGTTGGAAGCTTCAGAGGAAGGATCTGGATGATGAGATTGAGAGGTTCTGCAGAAGCATTGGAGTTAGTAGGCAGGTGTTCAAAGTTTGGATGCATAACCATAAGAACTCTTCTTCCTCTTCTTCTGCTTCTGCTTCTGCATCTGCTTCCACGGGAAACATCTCCTCCCTCACCCACTGA 699 0.5122 MALALALALALYSDWTLSGEKEAKQNGSQKILNQPLLFSDTSIVIAKAKKGVGLYSLCTLHLEPPREPPRERRMEGGSAEKWKSVYRECLRNHAASLGSYATDGCGEFTLDSGGLQCAACGCHRNFHRKVKYPVGPESPGAMDYGGEGGSKKRFRSKFSADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSIGVSRQVFKVWMHNHKNSSSSSSASASASASTGNISSLTH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03755 232 SUPERFAMILY Homeodomain-like 140 209 IPR009057 -
Phco4g03755 232 NCBIfam homeobox domain, ZF-HD class 151 209 IPR006455 -
Phco4g03755 232 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 76 210 - -
Phco4g03755 232 Pfam ZF-HD protein dimerisation region 85 130 IPR006456 -
Phco4g03755 232 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 86 130 IPR006456 -
Phco4g03755 232 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 86 129 IPR006456 -
Phco4g03755 232 MobiDBLite consensus disorder prediction 210 232 - -
Phco4g03755 232 Gene3D - 140 215 - -
Phco4g03755 232 FunFam Zinc-finger homeodomain protein 2 141 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03755 Phco-Chr4 56875843 56877485 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phco4g03755 ZF-HD_dimer 6.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03755 4 56875843 56877485 Phco5g00378 5 3323574 3324095 PCT