Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03723 ATGGTCGGTTACAACGAAGGTGGTGAGTTCAGCATGGCTGATTATGCACTCAATGGAAGAAAACTCAGGCCTCTCATGCCAAGGCCAGTGACTTCTCCTAACAACACTCCAAACACAAACTCTCCATGCTTGGGCCGCATCCATCATGGCAACGATTTCTTTTCACAATATCACAATCTGGCATCAGTGGCAGATCAAGGCAAGAGAGAGTTCAATCCTCCACCAGTAGTGGTGAGTTCAAGGTGGAATCCAACTCCAGAGCAGCTAAGGGCATTGGAGGAATTGTACAGAAGAGGGACAAGAACACCATCTGCTGAGCAAATCCAACAAATCACGGCACAGCTTCGAAGATTTGGAAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCGAGGGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGCGGCCGAGGGTCATCACACCCGTGACTTTGATGGTACTCTTGACAAGAAAGACTTAGGGGCAAGTAGGACAGCGTTTGAAGTCGAACAGACCAAGAACTGGGAATCCTCTACAAACTGCAGTAGTACGCTTGCAAAGGAATCTGTTTCAATACAAAGGGCAGCAAAAGCAGCCGTTGCAGATTGTAGAACAGACGGATGGCTCCAATTCGACGAAGAAGAGTTACAGCACACAAGAAACTTAATGGAGAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTCCCCCTCCTACTGTTTCACCCCACCTCATAAACACACCTCCTACCATCTCTACTGCTAGCATGGCCACCACACCCTCAGTAACAGCAAGAGTAATGGACCCAAAGCTCATTAAGACTCGTGATCTCAGCTTCTTTATTTCACCTAACAGAGAAAACGGTATTATCCACTTAAGCAGTATCAACACCTACACCCCGGATGATAATTCTGTGGAATCTCAAACACTTCAACTTTTCCCAATAAGGAACGGGGATGAAAGCAGTGATAACCTTAACCACCAAAAAGAGACAGAGGTATCAGTCTCAGCAATGAATGCCCCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAAGTGA 1083 0.4608 MVGYNEGGEFSMADYALNGRKLRPLMPRPVTSPNNTPNTNSPCLGRIHHGNDFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHTRDFDGTLDKKDLGASRTAFEVEQTKNWESSTNCSSTLAKESVSIQRAAKAAVADCRTDGWLQFDEEELQHTRNLMERNATWHMMQLSCPPPPTVSPHLINTPPTISTASMATTPSVTARVMDPKLIKTRDLSFFISPNRENGIIHLSSINTYTPDDNSVESQTLQLFPIRNGDESSDNLNHQKETEVSVSAMNAPSQFFEFLPLKK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03723 360 Gene3D - 78 140 - -
Phco4g03723 360 MobiDBLite consensus disorder prediction 141 163 - -
Phco4g03723 360 FunFam WUSCHEL-related homeobox 4 79 146 - -
Phco4g03723 360 SMART HOX_1 77 144 IPR001356 GO:0003677
Phco4g03723 360 ProSiteProfiles 'Homeobox' domain profile. 85 140 IPR001356 GO:0003677
Phco4g03723 360 MobiDBLite consensus disorder prediction 138 163 - -
Phco4g03723 360 CDD homeodomain 81 141 IPR001356 GO:0003677
Phco4g03723 360 Pfam Homeodomain 80 139 IPR001356 GO:0003677
Phco4g03723 360 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 67 354 IPR044555 GO:0003700|GO:0099402
Phco4g03723 360 SUPERFAMILY Homeodomain-like 80 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03723 Phco-Chr4 56731891 56733967 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco4g03723 Homeodomain 9.7e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03723 4 56731891 56733967 Phco4g03723 4 56731891 56733967 ECH