Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03714 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCGGATGATCCACAGGGGGCTACTTCATCAAAGAGCACCAAGTCCAGTGATGGCTCATCATCATCCACTGCCCCTAAGAAGCTATCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAACCTGGCCAGAGGAGAAAGAATGGACCCATCTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCTGATTCTGCGAGGCGTGATTCGGAGTCCAGCACGTCTAGGGATCCTGAAGTGGAAGAGGAATATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGGTACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGATGGTTTCTATGATCTGTATGGGATCTTGACTGAGTCAACGTCTGCAAGAATGCCTTCTCTTGTAGATCTGCAAGGAAAACCAACCTCAGATGATGTGACATGGGAAGCAGTCTTGGTCAATAGGGCTGGTGATTCCAACTTGTTGAAACTTGAACAAGAAGCCATGAAGATGGCTGCCAATTCAGGAAAAGATTTTGAAGTAGTTTTAAATAGTACTTTGATACACAAGCTTGCAATAATGGTGGCTGACTATATGGGTGGATCAGTTAAAGATCCTGAAAGCATGTCCAGAGCCTGGAAGAGTCTTAGTTACAGTCTAAAAGCAACCCTTGGCAGCATGGTTTTGCCACTTGGTTCGCTGACCATTGGGTTGGCTCGGCATCGCGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATTCCGTGTCGATTAGTGAAAGGACTGCAGTATATGGGTTCCGATGATGTGGCAATGAACTTTGTCAAGATTGATGATGGAAGGGAGTACATCGTCGACCTAATGGCAGCTCCTGGAGCACTTATTCCTTCTGATGCTACTGGATCACACATTGAATGCGATGGATCTTCCTCTGTGGCCAGTCCTTCATCAAGAGAGCTAGATTCGTCCAATGTAGCATCATTCAGTAGCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGACTGTGGAGGGAAAGAATCCGGTGTGAGTGGGCTTGCTACAGTCAAGGAATATTTAAAGAAACCATCAAATGAATCCAAAAATACCCCCTTTGCAGAGAACATCAGAGTGAAGGAATCTTCCAGCAGACCTAACTATTCATACATGCATGGAAGATCTCCTTCTTGGACTGAAGGCATCAGTTCCCCTGCAGCACGTAGAATGAAAGTCAAAGATGTTTCTCAATACATGATTGATGCTGCTAAGGAGAATCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCACCTCCTAACTTATTTTCTGAAATGTATCATGGGCAGTTAGGTACTTCAACTGGTACCAATTTTCTAACTGAACAAAAAGATGAAAATAAACAAGCAAGTGTGCAGCAAGAAATTAAGACTGATGACAACCTAGTTCCTGCTAGATTTTTGCCTCCTTTACCTTGCCTCAAAATTCTTCGCAAAGCAACTCCTGGCAGTCAGCTGGATTCTAGGCCTGTAGATGGCTTAGGAATTGGTCTTCCTCTTGATACAGGGGAAACTGCTGGACATAGCATACCATCTCAGGCAGAAGCAGCTCGGGTAAAGTATGGGAAAAATGTCCCAGTGGCAGCGGCTGCAGCTGCTGCTGCGGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGACAAAATCAAACACTGACTCAAATCTCGAGATCCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACTACTGCTGCTGTCAGTAAGTATGAGCAGGGCAGTCGAAGTGATGGGGATACAGAGGGTGGTGGTTCTGAGTCAAAGGGTAGTGGTGATGGAGAGCCTAATGCTTTAGGAGAAAACTCAGAAGGTGAGAGAAAATCTGATAGATCGGTAAGTAATGACAGCACAAAATCTGATTCTGCACTGGATGAGGTTGCCGAGTATGACATTCCATGGGAGGAAATCAAAATGGGAGAGCGTATCGGACTAGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCCGTAAAAAAGTTCTTATATCAAGATATCTCTGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGGCCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGGAGGCGGTTGCGGATGGCCCTTGATGCTGCCCGAGGAATGAACTATCTGCACAGCAGTACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGCACCTTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAATGGATGGCTCCAGAAGTGTTGAGAAACGAACTTTCAGATGAAAAGTGCGACGTTTTCAGCTATGGCGTCATATTGTGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTCGGTGCAGTGGGTTTCCAACATCGCCGTCTTGACATTCCAGATGATGTAGACCCTGCCATTGCAGATATTATCAGACAATGCTGGCAGACAGATCCAAAGTTGAGGCCCACATTTGCTGAAATCATGGCTACTCTGAAGCCATTGCAGAGGCCAATTACTGTTTCTCAAGTGCCTAGATCAAGTGCTCAATCATCACGAGTTGCTGAATTTCGTGCAGGATAG 3000 0.4477 MKNILKKLHIMSNQSDDPQGATSSKSTKSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPNLARGERMDPSDSVSSGGLDVVSDSARRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGKPTSDDVTWEAVLVNRAGDSNLLKLEQEAMKMAANSGKDFEVVLNSTLIHKLAIMVADYMGGSVKDPESMSRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSDDVAMNFVKIDDGREYIVDLMAAPGALIPSDATGSHIECDGSSSVASPSSRELDSSNVASFSSGVGSSSEETSDCGGKESGVSGLATVKEYLKKPSNESKNTPFAENIRVKESSSRPNYSYMHGRSPSWTEGISSPAARRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEMYHGQLGTSTGTNFLTEQKDENKQASVQQEIKTDDNLVPARFLPPLPCLKILRKATPGSQLDSRPVDGLGIGLPLDTGETAGHSIPSQAEAARVKYGKNVPVAAAAAAAAAVVASSMVVAVTKSNTDSNLEIPVAAAATATAAAVVATTAAVSKYEQGSRSDGDTEGGGSESKGSGDGEPNALGENSEGERKSDRSVSNDSTKSDSALDEVAEYDIPWEEIKMGERIGLGSYGEVYRGEWHGTEVAVKKFLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHSSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAIADIIRQCWQTDPKLRPTFAEIMATLKPLQRPITVSQVPRSSAQSSRVAEFRAG 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03714 999 ProSitePatterns Protein kinases ATP-binding region signature. 725 747 IPR017441 GO:0005524
Phco4g03714 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Phco4g03714 999 Pfam Protein tyrosine and serine/threonine kinase 719 971 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 Gene3D Transferase(Phosphotransferase) domain 1 798 981 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 651 706 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 8 60 - -
Phco4g03714 999 PRINTS Tyrosine kinase catalytic domain signature 793 806 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 PRINTS Tyrosine kinase catalytic domain signature 832 850 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 PRINTS Tyrosine kinase catalytic domain signature 942 964 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 PRINTS Tyrosine kinase catalytic domain signature 879 889 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 PRINTS Tyrosine kinase catalytic domain signature 898 920 IPR001245 GO:0004672|GO:0006468
Phco4g03714 999 SUPERFAMILY Protein kinase-like (PK-like) 705 970 IPR011009 -
Phco4g03714 999 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 682 697 - -
Phco4g03714 999 ProSiteProfiles Protein kinase domain profile. 719 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03714 999 FunFam Serine/threonine-protein kinase CTR1 798 981 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 84 102 - -
Phco4g03714 999 CDD STKc_MAP3K-like 725 971 - -
Phco4g03714 999 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 981 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 1 102 - -
Phco4g03714 999 FunFam Serine/threonine-protein kinase isoform 1 710 797 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 354 397 - -
Phco4g03714 999 MobiDBLite consensus disorder prediction 354 392 - -
Phco4g03714 999 SMART serkin_6 719 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03714 999 Pfam Ethylene-responsive protein kinase Le-CTR1 141 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03714 Phco-Chr4 56681746 56689413 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco4g03714 PK_Tyr_Ser-Thr 4.3e-67 CL0016