Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03695 ATGAAAGGTGGCGTTGCATTGTGGCTTGACGAGAAGAACTCAATGCTCATTGTTTCTTCTGAGATTGCCATTACTTTTGTTTTTTACCTTGGTTCTTTTTCTTGGCTATCTTCACATAGGCACATAACACAGAATGTTTCAGCCACTGCAGCTGTTTTCACTTCTTCAATCTTCATTCTGGAACAAAAAATGGCAGGCTCGGATCCGACCAAAAAAGTGGCTGATAGATATCTGAAGCGTGAAGTTCTCGGTGAAGGTACCTATGGAGTTGTGTACAAAGCCATTGATACCCACACAGGACAGACGGTTGCAATTAAGAAAATTCGGCTTGGCAAGCAGAAAGAAGGGGTAAATTTTACAGCTCTTAGAGAAATAAAGCTTCTTAAAGAGCTTAAGGATCCTAATATTGTTGAATTGATAGATGCATTCCCACACAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACGGACCTTGAAGCTGTCATACGAGACCGAAATATTTTTCTTTCACCGGCTGATACAAAATCCTACCTTCAAATGACGCTAAAAGGTCTTGCTTTTTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAATAATTTATTGATAGGATCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGAATGTTTGGAAGCCCAGATAGAAGGTTCACTCATCAGGTTTTCGCTCGGTGGTATAGAGCTCCTGAGCTATTATTTGGTGCCAAGCAATATGGTTCTGGGGTAGATGTCTGGGCTTTAGGTTGTATATTTGCTGAACTTCTTCTCCGTCGACCCTTTTTGCAGGGTACAAGTGACATCGATCAATTAGGAAAGATTTTTTTGGCATTTGGCACTCCAACATCTTCTCAGTGGCCTGATATGATATACCTGCCTGATTATGTCGAATACCAATATGTTCCTGCACCCCCTTTGCGTTCTTTATTTCCGATGGCAACTGATGATGCTTTAGATCTGTTGTCAAAGATGTTTACATATGATCCCAAAGCTAGAATTTCAGTGCAGCAGGCACTAGAGCATAGGTACTTCTCTTCTGCTCCTCTGCCTTCAGATCCAGACAAGCTCCCTAGACCTGCTCCTAAGAGGGAATCTAAGGCTTCTGATTTCAATTTACAGGAGGGTCCTACTGTGTTATCACCTCCAAGGAAGTCTCGGAGAGTGATGCCAGGACGTGATGGGTTTGAAGGAAATTCCCAGCAAGCAGATAAGGTTGATGGCAGTTTTGGTGATTTCAGGCAGACAACCGATGATAATTCAGGCAAGAATGAATCAGCTCCAATGTCTGTAGATTTTTCTATCTTTGGATTAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGAACATATTTAAAAAGAAAATTAGATCTAGAATCTCAACAGCCAGAATGA 1437 0.4127 MKGGVALWLDEKNSMLIVSSEIAITFVFYLGSFSWLSSHRHITQNVSATAAVFTSSIFILEQKMAGSDPTKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIVELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADTKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARMFGSPDRRFTHQVFARWYRAPELLFGAKQYGSGVDVWALGCIFAELLLRRPFLQGTSDIDQLGKIFLAFGTPTSSQWPDMIYLPDYVEYQYVPAPPLRSLFPMATDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLPSDPDKLPRPAPKRESKASDFNLQEGPTVLSPPRKSRRVMPGRDGFEGNSQQADKVDGSFGDFRQTTDDNSGKNESAPMSVDFSIFGLKPPNRPTINSADRTYLKRKLDLESQQPE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03695 478 Pfam Protein kinase domain 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03695 478 PANTHER CELL DIVISION PROTEIN KINASE 75 363 - -
Phco4g03695 478 CDD STKc_CDK7 76 370 IPR037770 GO:0005675|GO:0008353|GO:0070985
Phco4g03695 478 SUPERFAMILY Protein kinase-like (PK-like) 72 364 IPR011009 -
Phco4g03695 478 FunFam Putative cyclin-dependent kinase 7 158 373 - -
Phco4g03695 478 Gene3D Transferase(Phosphotransferase) domain 1 158 373 - -
Phco4g03695 478 ProSiteProfiles Protein kinase domain profile. 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03695 478 MobiDBLite consensus disorder prediction 358 440 - -
Phco4g03695 478 SMART serkin_6 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03695 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Phco4g03695 478 ProSitePatterns Protein kinases ATP-binding region signature. 83 107 IPR017441 GO:0005524
Phco4g03695 478 MobiDBLite consensus disorder prediction 425 440 - -
Phco4g03695 478 FunFam Cyclin-dependent kinase D-1 68 157 - -
Phco4g03695 478 Gene3D Phosphorylase Kinase; domain 1 68 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03695 Phco-Chr4 56573203 56578560 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Phco4g03695 Pkinase 3.3e-72 CL0016