Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03610 ATGCCAGGCCTCACCATTCAGATCACTCAAACCTTTCCATCCAGCCATCCAACTATGACCACCCCTTCCTCCTTCCTTGCATCCATACTCGCCCTTGCTTTCTTCTTAGCAACTTTGCCACAATCCTACTCTCAACAAAACAACACCTACTCCACTTGCAGCCAATCTTTCAGTTGTGGAACTCTCACAAACATATCCTATCCTTTCTGGGGAGGGAACCGACCCCAGTTTTGTGGCCGGAATGGCTTCAAGCTCACGTGCATGCATGACCAAAACACTTCGCTTCAAGTTGGTTCCCAAAACTTCCATGTACTACACATCAACCAAACGGCTTCCACCATGAGAATGGTGCGAACAGACCTTGTCTATGATCGCTGCTCTTCCAATTTCACCAACACTTCACTCAGTTCCAGTCCCTTTTCTTTTCTCCCCACCGTTCAGAATGTCACTGTATTCTACGAATGCCCCTCTCAGAATTCTGTTGGGGGAAACACTTTTACGTGTCAGAATGATACTAATAAACACGCTTTCTATGCGGTCAATGAAACTCAGCTGAAGCAGTTCCCGGGCCTTCAGAACTGCGGGGTTAGCGTTATGGTGCAAGTTTCACAGGGTGTTGTTTGGGATTCTGAGAACGGAATTGAGGCGCTGAATAAAGCGTTGGATCAAGGGTTCGATGTGAAGTTTGATGCAGAGTGGAGTTCTCAGTGCACAGCATGCAGGGATTCTGGAGGAGCATGTGGAACGAATGAGAAGAATTCCGATCAGTTTTCATGTTATTGCTCGGATGAAACTCGTGGTTCAGTGTGCTCTACTCACAAAAGTGGCAGGAAGAGCAGAGTGTTGAAGCTGGTTTTAGGTTTCGTTGGTACTGGATTTGCACTACCTCTCATCGCTGTCATCATATGCCGCAACAAAGCTAGAATTTGGAAATTTATATTAATACAATTGGGCAAGATAAAAAAGAATGATCGAGTTATAGAAGCCTTCCTTGAAAGCCAAGGTTCTATGGGTATAAAGAGATACAGTTTCTCTGAGATCAAGAAAATGACAAACTCCTTCAAAATTAAACTGGGGGAAGGTGGTTATGGATCTGTATACAAAGGAAAGTTACTCAATGGTGGCTCGGTGGCAGTGAAGATACTGAACGAGTCAAAGGGGAATGGCGATGAGTTTATCAATGAGGTTGCTAGCATAAGCAAAACATCCCATGTTAACATTGTCTCTCTCCTTGGATTTTGCCTAGAAGGAAGCAGAAAAGCCCTCGTCTATGAGTTTATGTCCAATGGTTCACTCGAGAAGTACATTCACAAGAAAGCAGCAGAAGAAAATAAAACTACTACTCCACCCTTGGGTTGGGACAGATTGAACCAGATTGCAATAGGCATAGCTCGAGGACTTGAGTATTTGCATAAAGGATGCAACACTCGGATTCTGCATTTTGACATTAAGCCACATAACATCCTTTTGGACGAAACCTATCGCCCAAAGATATCAGATTTTGGACTTGCTAAGCTGAGCACAAGAGATGAAAGCATTATATCAATGTCAAATGCTAGAGGGACAGTAGGGTATGTGGCTCCTGAAGTGTTCAATAAAAGTTTTGGAGGTGTTTCACACAAGTCTGATGTTTACAGCTATGGAATGATGCTACTTGAAATGGTTGGAGGACAGAAGAACATCAACGTTGAAGCTAGTCGCTCAAGCGAACTATATTTCCCACATTTGGTTATTTATAAGAAGCTTGAGCAGGGAAATGATTTGGGACTTGATGGGATATTGTCTGGTGAGGAAAATGAGATAGCAAAGAGAATGACTATGGTGGCTTTGTGGTGCATTCAGACAATTCCTTCTCACAGACCTACCATAAGTGCAGTGATTGACATGTTGTTAGGTAGTGCGGATTCTTTGGAAATGCCACCAAAACCTTTCCTCTCTTCTCCTCCAAGACCAACAGGTTTTTCCACTGCAATGTCCGAATCATTTGATAGTGTCTCATGCAGCTTATAG 2010 0.4353 MPGLTIQITQTFPSSHPTMTTPSSFLASILALAFFLATLPQSYSQQNNTYSTCSQSFSCGTLTNISYPFWGGNRPQFCGRNGFKLTCMHDQNTSLQVGSQNFHVLHINQTASTMRMVRTDLVYDRCSSNFTNTSLSSSPFSFLPTVQNVTVFYECPSQNSVGGNTFTCQNDTNKHAFYAVNETQLKQFPGLQNCGVSVMVQVSQGVVWDSENGIEALNKALDQGFDVKFDAEWSSQCTACRDSGGACGTNEKNSDQFSCYCSDETRGSVCSTHKSGRKSRVLKLVLGFVGTGFALPLIAVIICRNKARIWKFILIQLGKIKKNDRVIEAFLESQGSMGIKRYSFSEIKKMTNSFKIKLGEGGYGSVYKGKLLNGGSVAVKILNESKGNGDEFINEVASISKTSHVNIVSLLGFCLEGSRKALVYEFMSNGSLEKYIHKKAAEENKTTTPPLGWDRLNQIAIGIARGLEYLHKGCNTRILHFDIKPHNILLDETYRPKISDFGLAKLSTRDESIISMSNARGTVGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGQKNINVEASRSSELYFPHLVIYKKLEQGNDLGLDGILSGEENEIAKRMTMVALWCIQTIPSHRPTISAVIDMLLGSADSLEMPPKPFLSSPPRPTGFSTAMSESFDSVSCSL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03610 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Phco4g03610 669 FunFam PR5-like receptor kinase 427 642 - -
Phco4g03610 669 PANTHER RUST RESISTANCE KINASE LR10-RELATED 324 649 IPR045874 GO:0004672
Phco4g03610 669 SMART serkin_6 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03610 669 Pfam Wall-associated receptor kinase galacturonan-binding 53 118 IPR025287 GO:0030247
Phco4g03610 669 Gene3D Transferase(Phosphotransferase) domain 1 427 639 - -
Phco4g03610 669 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
Phco4g03610 669 Pfam Protein kinase domain 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03610 669 ProSiteProfiles Protein kinase domain profile. 352 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03610 669 SUPERFAMILY Protein kinase-like (PK-like) 339 661 IPR011009 -
Phco4g03610 669 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Phco4g03610 669 Pfam Wall-associated receptor kinase C-terminal 169 263 IPR032872 -
Phco4g03610 669 FunFam serine/threonine-protein kinase PBS1-like 321 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03610 Phco-Chr4 55960822 55964298 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco4g03610 Pkinase 3.5e-47 CL0016