Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03591 ATGGAAGAAAACCTACCTCCTGGGTTCAGGTTCCATCCTACAGATGAAGAACTCATCACATATTATTTATTAAGGAAAGTGTCTGACATTAGCTTCACATCCAAGGTTGTAGCAGTTGTTGATCTAAATAAATCTGAACCTTGGGACCTCCCAGGTAAGGCTTCGATGGGGGAGAAGGAATGGTATTTCTTCAGCTTGAAAGATCGGAAATATCCAACAGGGCTTCGAACGAACCGAGCCACTGAATCAGGGTATTGGAAAACCACAGGAAAAGATAAGGAGGTGTTTGGTGGTGGAGTTTTGATAGGGATGAAGAAAACTTTGGTGTTTTACATGGGTAGAGCTCCCAGGGGTGAGAAAAGTAACTGGGTTATGCATGAATACAGACTTCAAAACAAGCAACCCTATAGATCTTCTAAGGAAGAATGGGTGATTTGCAGAGTGTTCCAAAAGAGCTCGGCACCAAAGAAAGCACAGCAGACATCATCTTCCCAACCATCTGAAGAGTCCCCTACCTCAATGGTCAATGAATTTGGTGATGCTGACCTACCAAATCTCAATACAACCATTGCAAATTCATCTAGTATTGCAGGACAAACTTACAACACTGTTGATCCCATAAATGTCAACACAAACATGAACTTGACCATGAATTGGCCTTCTGCAACTGACCTTCCATCTCTCCCATGGCCTTCTGGGTTATTGCTCAATCCAAACCTTTCTGTCAATTCACTGCTTCTCAGGGCATTGCAGCTTAGGAGTACTTATCATCAAAGAGAAGCTGCAACTAGTGATCATCACTTTGCAACATATGTTCCTCAAACATTTCCTCACAATGATATTGGAACTGATAATCTCACTCCAAATCTGAGTGTCTCAGCTTCTTCCAGAGCTTTAGAATCTTGTGTGCTGCAGGAGCAACCATTCAATATGGACTCCATTTGGTGA 948 0.4241 MEENLPPGFRFHPTDEELITYYLLRKVSDISFTSKVVAVVDLNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEVFGGGVLIGMKKTLVFYMGRAPRGEKSNWVMHEYRLQNKQPYRSSKEEWVICRVFQKSSAPKKAQQTSSSQPSEESPTSMVNEFGDADLPNLNTTIANSSSIAGQTYNTVDPINVNTNMNLTMNWPSATDLPSLPWPSGLLLNPNLSVNSLLLRALQLRSTYHQREAATSDHHFATYVPQTFPHNDIGTDNLTPNLSVSASSRALESCVLQEQPFNMDSIW 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03591 315 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Phco4g03591 315 MobiDBLite consensus disorder prediction 155 177 - -
Phco4g03591 315 FunFam NAC domain-containing protein 100-like 14 155 - -
Phco4g03591 315 MobiDBLite consensus disorder prediction 155 174 - -
Phco4g03591 315 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Phco4g03591 315 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Phco4g03591 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 209 - -
Phco4g03591 315 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03591 Phco-Chr4 55825784 55827717 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g03591 NAM 1.5e-39 No_clan