Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03552 ATGGAAAACCAAACCGGTCTCAAACTCCGAATCTCTCGCATGTTTAGATCCTCCTTCGCTTCCTGCCGAACTCGTCATATAGCGGATGTAATGGAAAAAGCAGTTTTTGCACCACCCAGCTCCATCGAACCACCCTCCCCCAAAACCACAACCCATCCTCCCACTTGTAGGCCCAAAACAATCAACGACACTTGCATTCTGTCCTTTAACGATTCTCATTCTCTCTCTAGACGCAAAATCTCACATTTTTCATCACCTTTTCTCTGGGCTAACAACACCACCACCAACAACCTCAACCTTAACCTCGGTGTCATGTCCTGCCCCCCCACTTCTCCCAACGTTTCCCTCAACACAATCCACGAACACGATTTCATTTTCCACCACAAAACAAAGGCTTCAGATTCAACAAAAAACGTCAGGACCAAGAAGAAGAAGAAGAAGAAGAGACGTGCCCAGAAGAGAAGGGACTTTTTCCCTTTCAATTCATGCTCCAAAGACACCAACTTTGGCGGCTACTGGTGGTACAGCAGCGACGAAGACGATGAAACCGACACCCTTTTCTCCTCCAAGAGCCTCTCCTCCGACTCCTCCATGTCCCGGCGCCGTGGCCGGAAAAATGACCGGAGCTCCGACATGGGTGTTCTACCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCGAGCGACCCTTACAGTGACTTCAGGACTTCGATGCTGGAGATGATCGTGGAGAAGCAGATATTTTCGCCAGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTCTCTCTGAATTCGTATCATCATCATAAGATCATTGTCCAAGTCTTCACGGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTGA 879 0.4926 MENQTGLKLRISRMFRSSFASCRTRHIADVMEKAVFAPPSSIEPPSPKTTTHPPTCRPKTINDTCILSFNDSHSLSRRKISHFSSPFLWANNTTTNNLNLNLGVMSCPPTSPNVSLNTIHEHDFIFHHKTKASDSTKNVRTKKKKKKKRRAQKRRDFFPFNSCSKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSMSRRRGRKNDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03552 292 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 126 289 IPR038933 GO:0045892
Phco4g03552 292 NCBIfam uncharacterized plant-specific domain TIGR01568 225 288 IPR006458 -
Phco4g03552 292 MobiDBLite consensus disorder prediction 138 153 - -
Phco4g03552 292 ProSiteProfiles OVATE domain profile. 227 286 IPR006458 -
Phco4g03552 292 MobiDBLite consensus disorder prediction 188 214 - -
Phco4g03552 292 Pfam Transcriptional repressor, ovate 231 288 IPR006458 -
Phco4g03552 292 MobiDBLite consensus disorder prediction 197 211 - -
Phco4g03552 292 MobiDBLite consensus disorder prediction 130 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03552 Phco-Chr4 55517589 55518467 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco4g03552 Ovate 3.2e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03552 4 55517589 55518467 Phco4g03552 4 55517589 55518467 ECH