Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03529 ATGGAACGCATCGTTGGCGCCAAGTACAAGCTCGGCCGCAAGATCGGAAGTGGTTCATTTGGTGAAATCTACCTCGCGACGCATATTGACACCTTCGAGATCGTCGCCGTCAAGATCGAGAATAGTAAAACGAAGCATCCGCAACTTCTCTACGAGGCAAAGCTATACAGTATTCTTCAAGGAGGAAGTGGAATTCCTAACAGAAAATGGTCTGGCATTGACGGGGAGGAAAATGTGCTTGTTCTTGACTTGCTTGGGCCGAGTCTTGAAGATCTTTTTGTGTATTGTGGAAGGAAGTTTTCATTGAAGACAGTGTTAATGTTGGCTGATCAAATGATCACTAGGATAGAATATGTGCATTCTAAAGGATTTTTGCATAGGGATATTAAACCCGATAACTTTCTCATGGGACTTGGTCGGAAGGCCAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATACCGGGATTCGACTACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACAGGTACAGCCCGATATGCAAGTTGCAATACTCACCTTGGAATTGAGCAAAGTCGGCGAGATGATTTGGAATCTCTAGGATATGTACTTTTGTATTTCCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCTACGAAGAAACAAAAGTATGATAAAATATGTCAGAAGAAAGTTTCAACTCCTATTGAGGTACTTTGCAAAACTCATCCCGTAGGGTTTGCTTCGTACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGGATTCTTAAAGCGCCTATTTCGGGACCTATTTGCTCAAGAAGGTTATGATTTTGATTACGTTTTTGATTGGACCATTTTAAAGTACCAGCAATCTCAAAAGAATGCCGTGCTCCCTCCACTATCTCCGGTTCCAGGAGCAAGTAACAGTCGAGCAATCCCAATGGATATTGACAACCATCAAGGGCATGTTAAGGACCGTATTAGAGCAGGCGATGCTACTGGCTCTGGTGTTAAAAATCAGCTTAAATCTTCCGGGGGTAAAAATTTGAGTAATGAGAATCCACTTGACAAAAATATTTATGGAGAAGCAAATATACCGTCTGCTTCATACTCTCCTGCTAGTACTTCAAAAAGGAACTCCTTGAAGCAATCTTTGTCTGCTGAAGCTTCCAACCCTGGACCTTCAAGTAACTGGATGTCATCTCTGCAGCACATGTCTTCTGCTAAATGA 1251 0.4261 MERIVGAKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYSILQGGSGIPNRKWSGIDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICQKKVSTPIEVLCKTHPVGFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAQEGYDFDYVFDWTILKYQQSQKNAVLPPLSPVPGASNSRAIPMDIDNHQGHVKDRIRAGDATGSGVKNQLKSSGGKNLSNENPLDKNIYGEANIPSASYSPASTSKRNSLKQSLSAEASNPGPSSNWMSSLQHMSSAK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03529 416 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03529 416 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Phco4g03529 416 CDD STKc_CK1_delta_epsilon 8 282 - -
Phco4g03529 416 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco4g03529 416 PANTHER CASEIN KINASE-RELATED 8 368 - -
Phco4g03529 416 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03529 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Phco4g03529 416 MobiDBLite consensus disorder prediction 343 364 - -
Phco4g03529 416 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03529 416 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phco4g03529 416 MobiDBLite consensus disorder prediction 371 416 - -
Phco4g03529 416 MobiDBLite consensus disorder prediction 336 416 - -
Phco4g03529 416 FunFam Casein kinase I isoform delta-like 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03529 Phco-Chr4 55313186 55316534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phco4g03529 Pkinase 3.2e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03529 4 55313186 55316534 Phco4g03529 4 55313186 55316534 ECH