Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03458 ATGAGGAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGATACCACCGGTAAAGTCGTTGTGGTTGCGGTTAAAGCTTCTAGAGATATTTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGCAAGAGGGTATGGGGACTTTCCAGATTTACTACTGACTGTGCCTCTAGTAATTGGAGATCCAGTTTAGGCACTGCTTCAGATCAAAAAGAAGTTATTACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTTATGCGGAGCTGTGGCTGCTGAGGCCAAGAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAACATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATCATGAAACGGTCCAGGCCGAAGATTCTGCGCTTGAACTTGAACAGTTCACCTAAGATGGAACTAAAAATGGGTTGTCCATCGACACTTGCAAGAAACTTGAAAGAAGGCAACACTGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCACTGACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTCCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTTACCTTCATTCACGAGGGACTGACCAACCTAGAGGATATTGAGTCTGACTCCGAGAGTGAAAAGCTAAGTATGTCGTCCAAGAGCTCATATTTTCAGCCATGGATTGCAAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACATGCAAAGATCCAGTGACAAGACTTTGGCCTCTGCTTATGAAGCTTTACTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTAGGAATGCTTAATTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTGCACTAGCTAAAAGTTCACCTCCTGGCCCTCCCCCATTGTGCTCTATTTGTCAGCACAAGGCACCTGTGTTTGGCAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACAGGTGGTTTTTCACAGGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGTGGAGTCCTAACTGATGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAAAATGGAAGAAGATTGCTAGTTTACGAATACATCTGCAATGGCTCTCTCGATTCTCATCTCTACAGACGAAAGCAGAATGTACTGGAATGGTCAGCAAGACAAAAGATTGCAGTAGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGCGACCGAACAATATCCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACGAGAGTGATAGGAACATTTGGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTCTACTCGTTTGGGATAGTACTGCTGGAACTCATCACAGGAAGAAAAGCAGTGGACATAAACCGCCCCAAAGGACAGCAATGTCTCAGTGAATGGGCAAGGCCATTGCTTGAAAAAAAAGCGATTTATAAACTAGTAGATCCGAGCTTAAGAAACTGCTATGTTGATCAAGAGGTGTATCGCATGCTGCAATGTTCCTCTTTGTGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCACAGGTGCTGAGGATGCTGGAAGGTGACATTCTAATGTGA 2037 0.4364 MRSQKGRHEEEMGTSDTTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWGLSRFTTDCASSNWRSSLGTASDQKEVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSPKMELKMGCPSTLARNLKEGNTEHADIIRGPAVTPASSPEQGSPPLTATDIGTSSISSSDPATSPFFHSDNYERQRRGFTFIHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNMQRSSDKTLASAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAIALAKSSPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLTDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVENGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELITGRKAVDINRPKGQQCLSEWARPLLEKKAIYKLVDPSLRNCYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILM 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03458 678 MobiDBLite consensus disorder prediction 217 250 - -
Phco4g03458 678 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Phco4g03458 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 678 - -
Phco4g03458 678 SUPERFAMILY Protein kinase-like (PK-like) 382 673 IPR011009 -
Phco4g03458 678 CDD STKc_IRAK 408 674 - -
Phco4g03458 678 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Phco4g03458 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Phco4g03458 678 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
Phco4g03458 678 MobiDBLite consensus disorder prediction 212 250 - -
Phco4g03458 678 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03458 678 FunFam Dual-specific kinase DSK1-like 12 167 - -
Phco4g03458 678 Gene3D Transferase(Phosphotransferase) domain 1 478 676 - -
Phco4g03458 678 PANTHER OS01G0750732 PROTEIN 298 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03458 Phco-Chr4 54807994 54811242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco4g03458 PK_Tyr_Ser-Thr 2.8e-43 CL0016