Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03444 ATGGAAGGCCATGATACGCGGAGGGATAACGGTGGAAATGGAGTGGTAGTGCCATCGTGTACTTGCTCGCGCGACGAATTTCGCACACGTGGGGGTGGAAAAGGATTATCGCGAGTTGCTGCTGCTGCTAGAAACTGTTCTTCTGCTTCAAAACATGACATGGCTGTGACGCGGAACGTTAAGAAAAAACAAAAGCGTAAAGGTCTTCAGGAGCTGTTCACAGCCGATTACATTGTGAACAGAGTGTTACGGAAGGATGGTCCTCCGCTTGGTCAGGAGTTTGACTTTCTTCCTTATGGACCCAAATACTTCACTTCTGCTTGTCAAGAGGACCAAGGATCCTCAAAAAGGAGGAAGGGTTCCAAGAGTGGAATTCGAAGTCTGGCTGATTCTAATATGAAAGCACCTGTGAAGAAGCATGGTATTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCCTGATGCTGGAGACGTTCCAATTGGTTTTGGTGTTGATGGCCAAGAAGTTCCTTTACTTTCAAATTCTATAGGACAGAAACTGATCCATGAGAACAAGAGGTCACGGAAAACAGTTAACAGGAATGTAATGCCAAAAAATAAAACGCAGAATAAGAGAAATAAATCGCAGGATAAGAGGAAGATTTCCATGCAAAGAAGAGTGGGGGAATTGAACCTATATGTGACTCAGAATCAGTCACCAAACGAAAACTGTGGACTAGCTCTGGATAATTCAATATCTGAGGAGGGAGTTGATCGAGTTTCAATGTTAATTGATGATGAAGAGCTAGAGCTGAGGGAGTTACAAGAAGGCACCAATCTGTTTAGGTGTTCTAATCATCTTGCTGCCAGTGGAATGCTTGCCTGCTCACTTAGTAAGGATGCACTAGTGAAGTTTCCTCCAGATACCGTCAAGATGAAGAAACCTATCCATTTGCAACCTTGGGACTCCTCACCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCATTTATACATATGCAATAATTGTTGAGATTTGTCCCTTCACACTTGACGAGCTTGTTCAAGCTTTTCATGACAAGGACTCAATGTTACTTGGCAAGATTCATGTTGCCCTTCTCACACTTCTTCTATCTGACATTGAAGTGGAGCTCACTAATGGATTTTCACCTCATTTAAATAAATCTTGTAACTTTCTTGCATTGCTTCACTCGGTTGAAAGTGAGGAATACTCCCTGGACTTCTGGAGAAGATCTCTAAATTCTCTTACTTGGATTGAAATACTTCGTCAAGTGCTGGTTGCTTCTGGATTTGGTTCGAAGCAAGGCTCCTTACGTAGAGATGTCCTTAACAAGGAATTGAATCTTCTTGTAAACTATGGTCTATGCCCTGGTACCTTGAAGAGTGAGTTGTTTAATATCTTGTCAGAGAGAGGAAACACTGGATGCAAAGTGGTTGAGCTGGCGAAGTCAATGCAGAATGTTGGATTAAACCTTGCGAGCACTACAGAGGAGCTTGAGTCTTTAATTTGTTCTACGCTTTCAAGTGATATTACTTTATTTGAGAAGATTTCATCGACTGCTTACCGACTGCGAATGAGCACAGTTATGAAGGACAGTGATGAATCTCATTCAGATACAGAGGACTCTGGTAGTGTTGACGATGAACTTAATGGCACTGATACATGCAGCAGTGCTGATGATTTTGAAAATGATTCAATAAATTCCAGTATAAGAAAATTGAAGAGTGTAAACAGTCATAAAAATAATATGTTGGAAATATACACTGATATTGACGAGAGCCGTCCGGAAGAAGCGTGGTTGTTTGGACTCATGGAGAGTGAATATTCAAACTTAAACATTGAAGAAAAGTTGAATGCATTGGCAGCTTTAACTGATCTTGTTTCCTCTGGATCCAGCATTAGGATGAAGGATTTGTCTAAAGTCACAGCTGATTGCAATTCTAGCATCCAATTACGAGGGTCTGGAGCTAAAATAAAGAGATCAGCAGTAAAGAAACCTGGGCCACTTTTGAACCATAAAGTACACTTGAATTCTGATCCCTGTACTGTAGACTCCTCCTCATTATTCTCAAGATTCCACAGTTATGAAGCTTACTTCCAAAAGGGAAAAGGTTCATCTATTTCACATCCCGTTCAATCGGTGTTTTTGGGCTCAGATCGTCGGTACAATAGATATTGGCTTTTCTTGGGCCCATGTAATGTAGATGATCCTGGTCACAGGAGGATATATTTTGAATCTTCTGAAGATGGTCACTGGGAGGTTATTGATACTATGGAGACGTTGTGTGCTTTGATGTCAGTTCTGGACGACAGAGGAAAACGGGAGGCTCTTCTTATTGAATCATTGGAAAGGAGACAAACATCACTATGCAGAACTATGGCAAAGATTAATGTTAATAGTACTGCAATGGGTTCTATGTCACATTCTGATCAATCTGAACTGGATATGGTCACAGATGACAGTTATTCTCCTGCATCTGATGTAGACAACCTGAACATGACTGAGACTGCTAAAGACTCTTTGCCTTCAGCTGGGGCTGTGGTAATTGAAGCTGGAAAGAAAGTAGAGGATCAAATTAAAAAATGGATCCGTGTTCAAGAATACGATTCTTGGATTTGGAATTTTTTTTATTCAGATCTCAATGTTGTAAAATATGGTAGAAGGTCTTATATGGACTCTCTTGCCAGATGCAAGAGTTGTCATGATCTATACTGGAGAGACGAGAGACACTGTAAAATTTGTCATATGACGTTTGAGCTTGATTTTGACCTAGAAGAAAGATATGCAATCCACGTAGCCACATGCAGGGAGAAAGAAGACAGCAATGCATTTCCTAATCATAAAGTGCTGCCATCACAGATTCAATCTCTGAAAGCTGCAGTTTATGCTATCGAGTCTGTTATGCCTCAAGATGCCCTCGTTGGTGCTTGGAGGAAATCTGCACATAAACTATGGGTGAAACGACTCAGACGCACCTCAACTTTAGTAGAGCTTTTAAAGGTTCTTGATGATTTTGTTGGTGCCATCAATAAGGACTGGTTGTTTCAATGCAAATTTCCAGATGGTGTGGTTGAAGAAATCATTGCATCTTTTGCATCTATGCCCCATACCTCATCTGCCCTTGGTCTGTGGTTAGTGAAGTTAGATATCATAATTGCTCCCTACCTGGACAGAGTCCATCCACTGAATGCACAGGGAACCAGTCAACATGGTCCTTGGCGATAA 3237 0.4115 MEGHDTRRDNGGNGVVVPSCTCSRDEFRTRGGGKGLSRVAAAARNCSSASKHDMAVTRNVKKKQKRKGLQELFTADYIVNRVLRKDGPPLGQEFDFLPYGPKYFTSACQEDQGSSKRRKGSKSGIRSLADSNMKAPVKKHGIGKGLMTVWRATNPDAGDVPIGFGVDGQEVPLLSNSIGQKLIHENKRSRKTVNRNVMPKNKTQNKRNKSQDKRKISMQRRVGELNLYVTQNQSPNENCGLALDNSISEEGVDRVSMLIDDEELELRELQEGTNLFRCSNHLAASGMLACSLSKDALVKFPPDTVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYAIIVEICPFTLDELVQAFHDKDSMLLGKIHVALLTLLLSDIEVELTNGFSPHLNKSCNFLALLHSVESEEYSLDFWRRSLNSLTWIEILRQVLVASGFGSKQGSLRRDVLNKELNLLVNYGLCPGTLKSELFNILSERGNTGCKVVELAKSMQNVGLNLASTTEELESLICSTLSSDITLFEKISSTAYRLRMSTVMKDSDESHSDTEDSGSVDDELNGTDTCSSADDFENDSINSSIRKLKSVNSHKNNMLEIYTDIDESRPEEAWLFGLMESEYSNLNIEEKLNALAALTDLVSSGSSIRMKDLSKVTADCNSSIQLRGSGAKIKRSAVKKPGPLLNHKVHLNSDPCTVDSSSLFSRFHSYEAYFQKGKGSSISHPVQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRIYFESSEDGHWEVIDTMETLCALMSVLDDRGKREALLIESLERRQTSLCRTMAKINVNSTAMGSMSHSDQSELDMVTDDSYSPASDVDNLNMTETAKDSLPSAGAVVIEAGKKVEDQIKKWIRVQEYDSWIWNFFYSDLNVVKYGRRSYMDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHVATCREKEDSNAFPNHKVLPSQIQSLKAAVYAIESVMPQDALVGAWRKSAHKLWVKRLRRTSTLVELLKVLDDFVGAINKDWLFQCKFPDGVVEEIIASFASMPHTSSALGLWLVKLDIIIAPYLDRVHPLNAQGTSQHGPWR 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03444 1078 MobiDBLite consensus disorder prediction 187 215 - -
Phco4g03444 1078 MobiDBLite consensus disorder prediction 532 564 - -
Phco4g03444 1078 MobiDBLite consensus disorder prediction 532 547 - -
Phco4g03444 1078 SMART testlast3 320 379 IPR018501 -
Phco4g03444 1078 Pfam DDT domain 323 376 IPR018501 -
Phco4g03444 1078 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 716 789 IPR028941 -
Phco4g03444 1078 ProSiteProfiles DDT domain profile. 320 379 IPR018501 -
Phco4g03444 1078 PANTHER HOMEOBOX PROTEIN SIX 211 1055 - -
Phco4g03444 1078 MobiDBLite consensus disorder prediction 107 134 - -
Phco4g03444 1078 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 606 638 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03444 Phco-Chr4 54669012 54678165 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phco4g03444 WSD 1.3e-13 No_clan