Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03438 ATGTCAAGGTTGATTCAGGAGAAGAAAATAGGTGCAGGACGTGTGGTGGCAGTGGCAATTGAAAATAACAAAACAAGCCAATATGCAGCAAAATGGGCAGTTGACAATCTTCTTCCCAAAGAACAAGCCCTCTTATTGATCCATGTTAGACAAAGAGCATCTTCCATTCCTACACCAACGGGAAACCTCGTACCCCTTGATGGCGACGATGATGTGGCTAGAGCATACACGCAACAAATGGACAATGAATCTAAAGAACTTTTCGCATCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAGGTCTTACTGGAGGACATAGATATAGCTAAGGGATTAATAGAAGGTATTTCTAAGTATTCCATCGAGCTTCTGGTACTCGGGGCACCTTCAAGGAGTGGTCTTGTTAGAAGATTTAGGACATCGGATATTCCAAGTCTTGTGTCCAAAGGGGCACCACCATTCTGTACTGTGTACATCATTTCCAAAGGAAAAATCTCACTGGTGAAAACAGCTACTGCTAAACCTCCAGCTCGTAAGAATACACTGCAGCCGCAGCAGTCTCATGGGAGAATGGATCCACAACTAACACGCAATCCTGCCCTGACACGACCATCAATGGAGAAGTCAGCATACCTTGTCCGCCAGCAACCAGCAGATGAAGAGGAAATCATATCACCCTTCACAAGACCTGGTAGAGGAAGTTACAGATCATACGAGTCCTCAATCGTTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATATGGACTCTGGCATGATTCCTCGGCTTTCAACAGGCTCAGATTTTGACAGCAGAAGCTATGGCTCTTCATTCTCAGGAGCCAAATCAATTGATCATGGTGACTTCTCATTCAGTTCACAAGACAGTGGGACATCAATGTCATCGTCGATATTTTCAGCTTCAGATGAAGTGGAAGCTGAAATGAGAAGATTGAAGCTAGAACTGAAGCAGACAATGGAAATGTACAGTACTGCATGCAAGGAAGCTATGACAGCTAATCAAAAGGCACTAGAATTGCAGCGTTGGAAAGTGGAAGAAGAACAAAGGAAAGTGGAAGAGGCACGATTAGCTGAAGAAACAGCATTGGCAATGGTTGAGAAGGAGAAAGCAAAATGTATAGCTGCCATGGAAGCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACGAAAGAGAATGAGTGTAGAATCTGGGCATAAGAAGAAGACTGCAGATATATTTTCACACAGTCCTGCCAGGTACAGAAAATACACTATAGAGGAAATAGAAGAAGCAACAAATTTCTTTTCCAACTCTCTCAAGGTCGGTGAAGGTGGTTACGGGCCAGTCTACAGGTGTGAACTAGATCACACGCCAGTTGCAGTGAAGGTATTGAAACCAGGTGCAGCTCAGGGACAGTCACAGTTTCAGCAAGAGGTTGAAGTGCTAAGTAGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCGTGCCCAGAGTTTGGCTGCTTGGTGTATGAGTATATGGCTAATGGAAGTTTAGATGATTGCCTCTTCCGGAGAGGCAACAAAAGAGGTCTTCCCTGGCAGCTGAGATTCCGAATTGCTGCAGAGATTGCAACTGGGCTCCTTTTCCTACACCAGACAAAGCCAGAACCACTAGTGCACCGTGACTTGAAACCGGGGAACATTTTGCTTGACCGTAACTTCGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTTCCGCCTTCAGTTGAAGACACCGTCACACAGTATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTGGGAACCAAATCTGATATTTACTCACTGGGGATCATGCTTCTACAGATAATAACAGCAAAGCCACCAATGGGTTTGACTCACCTTGTTGAAAGAGCTATTGAGAAGGGGACTTTTGCGAACATGCTTGACCCAGCCGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTTGCCAAGCTTTGCTTGGGGTGTGCAGAAATGAAAAGAAAAGATAGACCTGATCTTGGAAAGGTTGTACTGCCCGAGCTAAATAAACTCAGAGATTTTGCTGAAGATAACATGCACATGATGATGATGTTCGGCTCAGGATTCGGTCCCAGAAGCAACTACAGTTACTCAAACTCCTCCAATTCCTCAGCTCAAAACTCCATGAGTGAAGAGTCAACGTCAGGAATGTCCGGATACGAAACCCGCTCAAGCTCATCGTATGCATAA 2337 0.4493 MSRLIQEKKIGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQALLLIHVRQRASSIPTPTGNLVPLDGDDDVARAYTQQMDNESKELFASFRVFCNRKSIQCKEVLLEDIDIAKGLIEGISKYSIELLVLGAPSRSGLVRRFRTSDIPSLVSKGAPPFCTVYIISKGKISLVKTATAKPPARKNTLQPQQSHGRMDPQLTRNPALTRPSMEKSAYLVRQQPADEEEIISPFTRPGRGSYRSYESSIVDSDISFVSSGRPSVDRMFPSMYDDMDSGMIPRLSTGSDFDSRSYGSSFSGAKSIDHGDFSFSSQDSGTSMSSSIFSASDEVEAEMRRLKLELKQTMEMYSTACKEAMTANQKALELQRWKVEEEQRKVEEARLAEETALAMVEKEKAKCIAAMEAAETSRKIAELEARKRMSVESGHKKKTADIFSHSPARYRKYTIEEIEEATNFFSNSLKVGEGGYGPVYRCELDHTPVAVKVLKPGAAQGQSQFQQEVEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKRGLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVEDTVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQIITAKPPMGLTHLVERAIEKGTFANMLDPAVEDWPVEHALHFAKLCLGCAEMKRKDRPDLGKVVLPELNKLRDFAEDNMHMMMMFGSGFGPRSNYSYSNSSNSSAQNSMSEESTSGMSGYETRSSSSYA 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03438 778 CDD STK_N 15 167 - -
Phco4g03438 778 SMART serkin_6 454 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03438 778 SUPERFAMILY Protein kinase-like (PK-like) 434 713 IPR011009 -
Phco4g03438 778 ProSiteProfiles Protein kinase domain profile. 454 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03438 778 MobiDBLite consensus disorder prediction 176 204 - -
Phco4g03438 778 MobiDBLite consensus disorder prediction 745 778 - -
Phco4g03438 778 FunFam U-box domain-containing protein 51 527 727 - -
Phco4g03438 778 PANTHER OS02G0152300 PROTEIN 15 737 - -
Phco4g03438 778 Gene3D Transferase(Phosphotransferase) domain 1 527 734 - -
Phco4g03438 778 Coils Coil 361 381 - -
Phco4g03438 778 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 426 526 - -
Phco4g03438 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Phco4g03438 778 Gene3D Phosphorylase Kinase; domain 1 433 526 - -
Phco4g03438 778 Pfam Protein kinase domain 457 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03438 778 Gene3D HUPs 14 159 IPR014729 -
Phco4g03438 778 Coils Coil 325 345 - -
Phco4g03438 778 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 151 - -
Phco4g03438 778 Pfam Universal stress protein family 14 145 IPR006016 -
Phco4g03438 778 MobiDBLite consensus disorder prediction 180 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03438 Phco-Chr4 54613733 54617600 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco4g03438 Pkinase 4.4e-39 CL0016