Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03321 ATGGCCACAAAAGGGTCAAGCTCTTCTGCTGCTGCTTCAGCTTCTGGGGATGCAAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCTCAGTACAATGTGTATGGAAACTTGTTCGAGGTGTCTTCCAAGTATGCGCCTCCTATTCGCCCAATTGGTAGAGGCGTTAATGGCATCGTCTGTGCTGCTGTTAATTCTGAAACACACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAATATAGTTGATGCTAAGAGGACATTGAGAGAAATCAAACTCCTTCGTCACATGGAACATGAAAATATTATTGCCATCAAGGATATCATACGACCCCCCAAAAGGGAGACCTTCAATGATGTGTACATTGTTTACGAATTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAAACTCTTGGTGAAGAGCATTGCCAGTACTTCTTATACCAGCTGTTACGAGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTAATGAATGCAAACTGTGACCTTAAAATTGGAGACTTTGGGTTGGCAAGAACAACATCTGAAACGGATTTCATGACTGAGTATGTAGTCACACGATGGTACCGTGCCCCAGAACTGCTCCTTAACTGTTCCGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTTGGTGAAATTATGACCAGAGAACCTTTATTTCCTGGGAAAGACTATGTTCACCAATTAAGGCTTATAACGGAGTTATTAGGTTCACCTGATGATGCAAGCCTAGAATTTCTCCGAAGTGATAATGCCAGAAGATACATTAGACAGCTTCCTCAGTACCGGAAGCAAAAATTCTCCACCAGATTCCCTAACATGTTGCCTGAGGCATTGGACCTGTTAGAGAAGATGCTTATATTTGATCCAAACAAACGCATTACAGTTGATGAGGCACTATGTCACCCTTATCTTTCATCACTCCATAACATCAACGATGAGCCAGTCTGTCCCAGGCCATTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACGTGAAGGAGCTCATTTGGAGGGAATCAGTGAAGTTCAATCCAGATCCACCCTGCCAGTAA 1146 0.4276 MATKGSSSSAAASASGDAKIKRVLTHGGKYAQYNVYGNLFEVSSKYAPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIVDAKRTLREIKLLRHMEHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQTLGEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSTRFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNINDEPVCPRPFSFDFDQPTCTEEHVKELIWRESVKFNPDPPCQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03321 381 Gene3D Transferase(Phosphotransferase) domain 1 131 360 - -
Phco4g03321 381 CDD STKc_TEY_MAPK 40 376 - -
Phco4g03321 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phco4g03321 381 FunFam Mitogen-activated protein kinase 131 360 - -
Phco4g03321 381 FunFam Mitogen-activated protein kinase 32 142 - -
Phco4g03321 381 Pfam Protein kinase domain 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03321 381 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Phco4g03321 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 45 335 - -
Phco4g03321 381 SMART serkin_6 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03321 381 ProSiteProfiles Protein kinase domain profile. 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03321 381 Gene3D Phosphorylase Kinase; domain 1 30 370 - -
Phco4g03321 381 ProSitePatterns Protein kinases ATP-binding region signature. 53 77 IPR017441 GO:0005524
Phco4g03321 381 ProSitePatterns MAP kinase signature. 82 185 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03321 Phco-Chr4 53746073 53748755 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco4g03321 Pkinase 1.3e-70 CL0016