Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03314 ATGTCTTCTGACCTCTACTCTTATGAAACCACTTTCCACACACATTCAAACTCAGACTTTCTCTCCTCTGATGGAGTTGGGGACCTTCCCTTTCTCTCCGACTCTTTTCCTTTCTTCCCCAATTCTCCCTCTAACGTAGCTCAGCACAATTCCAACTCCAATTCTCTCCCTTCTCTCGACCCTTTTTCCCCATCTTTTTTCTCTTTCTCCCCTCCAAGTTCCCACTTGGAAAGCCTCAGCCTTTACCATGCCAATCGCGTGCAGCCTCTGTCAAATGGAAAGAACTTGGTGAACGAGTTTGGAAGTTTCTCAGCTTTTGATGGGACTGAAGTGAAGACTGAGGAACGCCAATTGGGTGTTGATTGTGTCTACGCTCAACAACTCCTTCCTCACAGTTACAGTGGTGCTGAAAATTTTTCCAAGTACATGCACAGAAGCTTCAGCAGCAACTCCTTTGAAGGAAAACCTGGTTTTCTGTCACAACCTTACACTGATACTCTTGTGGACTCTCCAAATTTTCAAAGGCATGACTTGAGTTCCCCTGAAGACACTCTCTTCAGTGGACAAATGAGAAGGGTTTGCAGTACAGGAGATTTGCAGAACATGAAGGAAAATCGCATGTCTCCAACGGAGGCACCGTTGTTGGAGGAATCGAACTTCAAAGTAGGGCGTTACAGTGCGGAAGAGAGAAAAGAAAGAATCTCCAAATACAGAGCCAAGAGAAACCAGAGGAATTTCAACAAGACCATTAAGTATGCATGCCGAAAGACATTAGCAGATAATCGACCACGCATACGTGGCAGATTCGCTCGCAACGACGAAGCAGTCGACACTCCCAAGGCTTCATGTTCAACACGAGACGAAGATGATGTTGATTTCTGGATTGAAGAATTACGGTTGCATGAAGAACAAGACGATGTAACAGTGGGAGCAGAACAATATTTGAGAAGCTATGGAGGAACTCAGTTTCAGTATGGTGGCTTTTGA 987 0.4509 MSSDLYSYETTFHTHSNSDFLSSDGVGDLPFLSDSFPFFPNSPSNVAQHNSNSNSLPSLDPFSPSFFSFSPPSSHLESLSLYHANRVQPLSNGKNLVNEFGSFSAFDGTEVKTEERQLGVDCVYAQQLLPHSYSGAENFSKYMHRSFSSNSFEGKPGFLSQPYTDTLVDSPNFQRHDLSSPEDTLFSGQMRRVCSTGDLQNMKENRMSPTEAPLLEESNFKVGRYSAEERKERISKYRAKRNQRNFNKTIKYACRKTLADNRPRIRGRFARNDEAVDTPKASCSTRDEDDVDFWIEELRLHEEQDDVTVGAEQYLRSYGGTQFQYGGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03314 328 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 46 291 IPR045281 GO:0009909
Phco4g03314 328 ProSiteProfiles CCT domain profile. 230 272 IPR010402 GO:0005515
Phco4g03314 328 Pfam CCT motif 230 272 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03314 Phco-Chr4 53656600 53658300 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco4g03314 CCT 6.3e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00304 4 1926760 1928160 Phco4g03314 4 53656600 53658300 PCT