Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03303 ATGTGGTCGTGGTGGGGAAAGTCTTCTTCCAAAGAGGTGAAAAAGAAGGAAAACAGGGAAAGTATTATTCAGACCATACAGCGGAAATTAAAGAATGCCTCTGAAGAGAAATGCAATAATAAATCTGAAAGATCAAGGAGACATCGTGATGATGCCATCTCCAAGAAGGGATCTAGATCTCTTGCACCTTCAAGATCACCATCACCCTCTACACATGTATCCCGATGTCAAAGTTTTGCAGAAAGGCCACTCTCTCAACCACTCCCATTACCAGGGTCACATCTTTCAGATGCCATTGGTGCAAATCCTGGGGTTATTTTAACATCAAAACTTGATAGAGCCATAAACTCAAAGCCATCTCTATATTCCCCCCTTCCAATACCTGGTTTTGTTTCAAGCAAGGAAGACGCTACTGATATGGAAGGAGAAATAGCCACTGCATCTGTTTCTAGTGAAAGCTCAATTGATAGTGGCAACTCATTTGATTCGCCGCATTTTGTTAGTCCTCTGGCTTCTGATTGTGAAAATGGAAACCGAGCCACCATTAATAGTTCTTTCAGTCTGGGGCACAAGAATCAACCTCTTATTACTACCCAAAGAAACTCAAGAACATTCTCAAAACGAAGTCCTCAGTTGTGCAATAATAAGCCATTGTCTACCTCACCAAGAGCGGTTCCTTTACATCTGCAAAATCTGCAAGTAGCTTGCCCAGGTGGTTTGTGTAGTGTTCCAGATAGTTCAATATCAAGTCCTAGAAATGCAATGGGAGCTTTTGGTCCTGACCATATGTTGAACTCTGAATTACAGACAAGAAAAACTTATCCAGATATAGCTTCTGGGCACTCCTATAGTATGGTTTCAGGCCGTAATTCTAGTCATAATTCAGTTGGTGGGGATCTTTCAGGACAAATGATTTTGCCGCAAAACAGGTGTAGCCCTGAGTGTTCTCCAATAGTTAGTCCCAGAATAACAAGCCCTGGTCCCAGTTCCAGGATACAGAGTGGTACTGTGACCCCTCTGCATCCTAAAGCTGGAGGAACTGCAGCAGAAGCACATACAAGACGCCCTGATGATGTGAAACAAAAAAATCACCAGTTACCACTCCCTCCAATAGCAGTCACTAAGCCGTATGCATTTTCTCCAACCTATTCTGCATCAACAACTCCTTCAACCCCTCGTAGTCCGGGCGGATCCGAAAATTCGATAAGTCCAGGTTCACGCTGGAAAAAAGGGCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCGATGAAGGAGGTAACCCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCACAGCAACTAGGCCAAGAAATCGCAATGCTTAGTCGGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTCGATGACAGACTTTATGTATACTTGGAGTATGTCTCCGGTGGGTCAATCTATAAGCTGGTTAAAGAATATGGCCAGTTAGGTGAAATTGCAATTCGTAATTATACTCGGCAAATTTTGTTAGGACTTGCATATTTGCACGCCAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAATGGGAGGATAAAATTGGCAGATTTTGGGATGGCCAAGCATATAAGTGGGCCATCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCGGTTGATATTTGGAGTCTGGGATGCACTGTTTTGGAGATGGCGACAACAAAACCTCCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCGACAATTCCAGATCATCTTTCAGAAGATGGAAAAGATTTCGTCAAGCTTTGTTTGCAAAGGAATCCTCAAAATCGTCCCTCGGCTGCTCAACTTCTAGAGCATTCATTTGTTAAAAATGCTATGCTGGAAAGATCTATTTTAACTGCCGTTCCTTCAGAAGATCCAACTGCTATAATAAATGCAGTGAGATCTCTGGTCATCGGACCTGCAAAAAGTAATTCATGCTTAGACTCAGAAATAGCTGGGATCTATCCGCCCGGAAACTTGAGAGCTGGTTCTGGATCAAGTGATCCTCATACACCAAGGGACATCTCTTGTCCCATTTCTCCCTCTTTGCCTTATAAATCATTGCATACAAGTGGAAGGATGTCACCTCTAATATCTAGCCCTCATACTGCATCTGGCTCATCTTCGCCCCTAACCAGTGGCGGCGGTGCTATTCCATATCATCAGACAAAGCAATTAATACTCTCACATGAAGTTTCGGGTATGATCCAAAAGTCCCATAATGGTGTTATTCCTATATCTAGCCCTCGTACTGCGTCTGGCTCATCTTCGCCACTAAGCAGTGGCGGTGGTGCAATTCCATTTCATCAGACAAAGCAACAACTATTCTCACATGAAGTTGTGGGTATGATCCAAAAGTCTCAGAATGGTGCTATTCCAATGTCTGGCCCTCGTACTGCATCTGGCTCATCTTCACCACTAACCAGTGGTGGCGGCGCTATTCCTTTTCATCAGACAAAGCAACCACTATTCTCACACGAAGTTCTGAGTATGATCCAAAAGTCTCAGAATGGTGCTATTCCAATATCTGGCCCTCGTACTGCATCTGGCACATATTCGCCACTAACCAGCGGTGGCGGTGCTATTCCATTTCATCAGATGAAGCAACCACTATTCTCACATGAAGTTTCGGGTAGGATCCAAAAGTCTCAGAATGGTTGTATTCCAATATCTAGCCCTCCTGCTGCATCTGGCTCATCTTCGCCACTAACCTGTGGGGGCGGTGCTATTCCGTTTCATCAGACAAAGCAACCACTATTCTCACATGAAGTTGTGTGTATGACTCAAAAGTCTCAGAATGGTGCCATTCCAATATCTAGCCCTCGTACTGCGTCTGGCTCATCTTCGCCACTAACTAGCGGCGGCGGTGCTATTCCATTTCATCAGACAAAGCCACAACTATTATCAAATGAACTTGTGGGTATGTACCATAAGTCCCTAAATGGTGCTATTCCAATAGCTAGCTCTCGTACTGCATCTGGCTCATCTTCGCCTCTAACCAGTGGTGGCAGTGCCATTCCATTTCTTCAGACAAAGCAATCACAAGTCTCACATGAAGTTGTTGGTATGATCCAAAATCCTCAGCATGGTTTTTATTCATTTGGAAATACCCCTTATCATGGTTCTAAGCATGCGCAGTTTGGGAGAAACTTGCAAACTACACATGCTTGCCGGGATGTAGGTTCATCTGACAATAACCATTCTAGGAGGGCTGTCCAGGGAGATCCAATTGAATTTCGCGATGGGAAGTCATACTTGGCGGATTGCGTGTCACAACAGCTGTTGAGGGATTATGCACGGCTACATGCATGCCTGGATCTTAACCCCGATCCCCCAAATCCTGATCGCTCAAATGGCTAA 3528 0.4402 MWSWWGKSSSKEVKKKENRESIIQTIQRKLKNASEEKCNNKSERSRRHRDDAISKKGSRSLAPSRSPSPSTHVSRCQSFAERPLSQPLPLPGSHLSDAIGANPGVILTSKLDRAINSKPSLYSPLPIPGFVSSKEDATDMEGEIATASVSSESSIDSGNSFDSPHFVSPLASDCENGNRATINSSFSLGHKNQPLITTQRNSRTFSKRSPQLCNNKPLSTSPRAVPLHLQNLQVACPGGLCSVPDSSISSPRNAMGAFGPDHMLNSELQTRKTYPDIASGHSYSMVSGRNSSHNSVGGDLSGQMILPQNRCSPECSPIVSPRITSPGPSSRIQSGTVTPLHPKAGGTAAEAHTRRPDDVKQKNHQLPLPPIAVTKPYAFSPTYSASTTPSTPRSPGGSENSISPGSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRESAQQLGQEIAMLSRLRHPNIVQYYGSETVDDRLYVYLEYVSGGSIYKLVKEYGQLGEIAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGRIKLADFGMAKHISGPSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSEDGKDFVKLCLQRNPQNRPSAAQLLEHSFVKNAMLERSILTAVPSEDPTAIINAVRSLVIGPAKSNSCLDSEIAGIYPPGNLRAGSGSSDPHTPRDISCPISPSLPYKSLHTSGRMSPLISSPHTASGSSSPLTSGGGAIPYHQTKQLILSHEVSGMIQKSHNGVIPISSPRTASGSSSPLSSGGGAIPFHQTKQQLFSHEVVGMIQKSQNGAIPMSGPRTASGSSSPLTSGGGAIPFHQTKQPLFSHEVLSMIQKSQNGAIPISGPRTASGTYSPLTSGGGAIPFHQMKQPLFSHEVSGRIQKSQNGCIPISSPPAASGSSSPLTCGGGAIPFHQTKQPLFSHEVVCMTQKSQNGAIPISSPRTASGSSSPLTSGGGAIPFHQTKPQLLSNELVGMYHKSLNGAIPIASSRTASGSSSPLTSGGSAIPFLQTKQSQVSHEVVGMIQNPQHGFYSFGNTPYHGSKHAQFGRNLQTTHACRDVGSSDNNHSRRAVQGDPIEFRDGKSYLADCVSQQLLRDYARLHACLDLNPDPPNPDRSNG 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03303 1175 MobiDBLite consensus disorder prediction 1 20 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 27 56 - -
Phco4g03303 1175 Coils Coil 16 36 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 990 1012 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 59 78 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 718 772 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 380 409 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 348 362 - -
Phco4g03303 1175 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Phco4g03303 1175 MobiDBLite consensus disorder prediction 739 772 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 323 337 - -
Phco4g03303 1175 FunFam Mitogen-activated protein kinase kinase kinase 406 688 - -
Phco4g03303 1175 ProSiteProfiles Protein kinase domain profile. 408 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03303 1175 SMART serkin_6 408 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03303 1175 MobiDBLite consensus disorder prediction 323 368 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 27 78 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 797 821 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 990 1018 - -
Phco4g03303 1175 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 28 696 - -
Phco4g03303 1175 CDD STKc_MEKK1_plant 407 664 - -
Phco4g03303 1175 Gene3D Transferase(Phosphotransferase) domain 1 406 688 - -
Phco4g03303 1175 SUPERFAMILY Protein kinase-like (PK-like) 406 665 IPR011009 -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 939 958 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 380 407 - -
Phco4g03303 1175 MobiDBLite consensus disorder prediction 845 864 - -
Phco4g03303 1175 Pfam Protein kinase domain 409 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03303 Phco-Chr4 53524754 53531222 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g03303 Pkinase 6.8e-71 CL0016