Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03274 ATGAAGTTATGTACTTCATTGCTGCTGCTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCAGGGTGCCTTCAAATGAAGTTTGGGCACTTAAAACATTCAAAGAAGCTGTTTATGAAGATCCACATATGGCTTTGTCCAATTGGAATTCTCTGGATTCAGATCCTTGTGACTGGAACGGTGTTTCTTGCACTGCACTGCGAGATCATGTCATAAAGCTTAATATATCAGGGGCTTCGTTGAGGGGGTTTCTTGCTCAAGAATTTGGGAAAATCACCTACATACAAGAACTGATCTTGCATGGCAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGTTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTATCTGGACCAATTCCACCGGAGATTGGAAATTTGACCCAACTTATGAAAATAAACCTGCAGTCTAATGGGTTGACTGGTAGGATACCTCCGGAGCTAGGAAATTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTAGCAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCAGGTGTGAATTTAACTGGCTTCTGTCGTTCATCTCAGTTAAAAGTAGCAGATTTTTCATATAACTTTTTCGTTGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGATCAAGCTTTCAAGGAAATTGTTTCCATATTGGAGACATAAAACAGAGGACTTTGGTGCAATGTGCAGGTGCTTCACCAGCTCAAAGTGGTCCAGTAGTAAACCCGAGGCATGAACCTGCTACCAAACATGTAACCAAGCATCAAGAAGCATCGAAACCTTCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAAAGGTGTAACAACAAATCATCTATCATTATACCTTGGAAAAAATCTGGAAGCGGAAAAGATTATTTGGCATTACAGATAGACTCGGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCCCCGGATAGTCTCGTGTACAAGGGTACAATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGAGTTGGACAGGATACCTTGAGCTCTATTTTCAAAGAGAGGTGGCAGACCTGGCAAGGTTAGATCATGATAACGCAGGAAAACTGCTAGGATATTGTAGAGAGAGCAGTCTATTTACAAGGATGCTGGTTTTTGAATATGCATCAAACGGAACACTTTATGAGCACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCTTGGACACGGCGTATGAAAATTGTCATTGGCATCGCACGTGGACTCAAGTATTTGCACACTGAAATTGAGCCACCATTCACCATCTCAGAATTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCTAAGCTGGTGGATTTTGAAAGTTGGAAGACCGTTCTTGAAAGATCAGAAAAGAATTCTGGATCAGTTAGCAGCCAAGGTGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCGCGCCATCTTGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCACCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTTAAAGCAATATGTGAGGTGATAATTCTTTGCATCAGTCCCGATCCCTCTGTCCGTCCATCAATGCGTGAATTATGCATTATGTTGGAGAGCAGAATAGACACGTCAATAAATGTGGAGCTAAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCCCTTTCATCATAA 1989 0.4213 MKLCTSLLLLGLVSMLSFVASVRVPSNEVWALKTFKEAVYEDPHMALSNWNSLDSDPCDWNGVSCTALRDHVIKLNISGASLRGFLAQEFGKITYIQELILHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNLTQLMKINLQSNGLTGRIPPELGNLKYLQELRLDRNKLQGSLPGGSSSNFSSNMHGMYASGVNLTGFCRSSQLKVADFSYNFFVGSIPKCLKYLPRSSFQGNCFHIGDIKQRTLVQCAGASPAQSGPVVNPRHEPATKHVTKHQEASKPSWLLALEIVTGTMVGSLFVIGILTAIQRCNNKSSIIIPWKKSGSGKDYLALQIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEESWTGYLELYFQREVADLARLDHDNAGKLLGYCRESSLFTRMLVFEYASNGTLYEHLHCYGEGCQLSWTRRMKIVIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTVLERSEKNSGSVSSQGAVCVLPNSLEARHLDPKGNIYAFGVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVIILCISPDPSVRPSMRELCIMLESRIDTSINVELKASSLAWAELALSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03274 662 SUPERFAMILY L domain-like 27 235 - -
Phco4g03274 662 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Phco4g03274 662 Pfam Protein tyrosine and serine/threonine kinase 367 633 IPR001245 GO:0004672|GO:0006468
Phco4g03274 662 Gene3D Phosphorylase Kinase; domain 1 339 444 - -
Phco4g03274 662 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
Phco4g03274 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Phco4g03274 662 Gene3D Ribonuclease Inhibitor 25 255 IPR032675 -
Phco4g03274 662 PANTHER PROTEIN MALE DISCOVERER 2 14 660 - -
Phco4g03274 662 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Phco4g03274 662 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03274 662 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03274 Phco-Chr4 53326707 53330575 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco4g03274 PK_Tyr_Ser-Thr 7.5e-18 CL0016