Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03246 ATGGAGAAACATCAACCATTCTACCCTATCTTATCTTTATCTTCATCTTCATCATCTCCTTCTACTTCTTATTTTAATAACTCTCATGTTCATCATGTGAAGAAGGGTGCAGGTTTCTTAAGAACTCAAGAGCCAAACCAGAAAGTTGGCAAAGAAATGAAGCAGCACAGATTTGCATTTCAAACAAGGACTCAAGTTGATATACTTGATGATGGATATAGGTGGAGAAAGTATGGGGAAAAGTCCGTGAAGAACAACAAATTCCCTAGAAGTTACTACAGATGTTCTTATCGAGGGTGCAATGTGAAGAAACAAATCCAACGCCATAGCAAAGACGAAGAGATTGTGGTAACAACCTATGAAGGGACTCATTCTCATCCTGTGGAGCAGCCAATTGAGAGTTTCGAGCAGATATTGAAAAATCATCACATATATAGCCTCACTCTATAG 450 0.3844 MEKHQPFYPILSLSSSSSSPSTSYFNNSHVHHVKKGAGFLRTQEPNQKVGKEMKQHRFAFQTRTQVDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSKDEEIVVTTYEGTHSHPVEQPIESFEQILKNHHIYSLTL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03246 149 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g03246 149 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g03246 149 Pfam WRKY DNA -binding domain 70 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g03246 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 130 IPR044810 GO:0003700
Phco4g03246 149 FunFam WRKY transcription factor 57 55 129 - -
Phco4g03246 149 SUPERFAMILY WRKY DNA-binding domain 61 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g03246 149 Gene3D WRKY domain 56 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03246 Phco-Chr4 53127301 53128042 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g03246 WRKY 1.4e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03246 4 53127301 53128042 Phco4g03246 4 53127301 53128042 ECH