Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03218 ATGGAGGATGGCCGTCAAAATGAAAATGACAGGCATAAGATGGAATACTACAGGGGAGCACATTCCATGTGGAATACTGATTCACAGCATCAAGTGAAAGAGCCAAATGCACTGGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTGGAGCTTGAACTGGAGGCTGCAATATCTGTAAAGAATGAAGCATTGGCTGCTCGAGATGCAGCCATTCGGCAGAGGGATGAAGCACTTGCTCAAAGGGATAATGCCATTTTGGAACGGGATAATGCCCTTGCAGCTCTTCAGAGTCGGAACAATTCTGTCAGCTTCCCATTTGGCAGTGGAATCCAATGTGGATCAAAACGAGTGCGCCATTCTTCAAACCATCTGCCTAACATGTCTGAAGCTTCGTACAAAACAAAGGATGCCTCCTCAATGGCAGTTATACCTTCTGAAGTTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTAATTAGTTCTAAGGCATCAAACCCACCGTACAAAATAAAGAAAATGGGTGAGGATTTAAATAGGAAGGCTTCTTTTGAAGGTACAAAGATCCGATCTGAATGGCATAGGCAAGATGTTGGCCTGAATTTGGTTACATTTGACGAAACTACCATGCCAGTTCCAGTTTGCACATGTACTGGCATACCACGACAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCATCATGTTGTACCACAACATTGTCTATGCATCCATTACCACAGCTTCCAAACAAGCGCCATGCTCGCATTGGAGGACGAAAGATGAGCGGAAGTGTTTTTACAAGACTTCTCAGCAGGTTGGTGTTAGAAGGCCATGATTTATCTATACCATTAGATCTTAAGGAGTACTGGGCCAGACATGGAACCAATCGCTACATCACTATCAAGTAG 939 0.442 MEDGRQNENDRHKMEYYRGAHSMWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILELELEAAISVKNEALAARDAAIRQRDEALAQRDNAILERDNALAALQSRNNSVSFPFGSGIQCGSKRVRHSSNHLPNMSEASYKTKDASSMAVIPSEVVKSHQAKRTKENKVISSKASNPPYKIKKMGEDLNRKASFEGTKIRSEWHRQDVGLNLVTFDETTMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVLEGHDLSIPLDLKEYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03218 312 SMART GAGA_bind_2 1 312 IPR010409 -
Phco4g03218 312 Pfam GAGA binding protein-like family 13 312 IPR010409 -
Phco4g03218 312 MobiDBLite consensus disorder prediction 156 180 - -
Phco4g03218 312 PANTHER - 21 312 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03218 Phco-Chr4 52876855 52877893 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phco4g03218 GAGA_bind 1.1e-94 No_clan