Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03127 ATGGGAAGCACAGAGGAGATAAAAGTGAAAGGTGAGAGGATTGGATTATGGATCGAAGGTGGGGTGGGGAAGTTGAAAAAAAAAAGGGAAGAGGACAAGAAGTTGAAGAAAAAGAAAGCAGACCAGGTTCGAAGTTTGAAGGACTTGTCTACCCTACGTACCGCCCTCCTCCAGGCACGCGTGAAAATAAACCCTTTCTGGCTTCCTATAAAGCTTAACCTCACCTTTCTTTTCTCAAGTTTAAGTTTAAGCTCAAACACAACAACTATACTTAAGGGTAGGAGGAACACAGTCAGAAACCAGAGCAGAGAAAAACCGCGAATGCAAGGACAACTAGAATTACCACCCGGGTTTAGATTCCACCCCACTGACGATGAACTCGTGAATCACTACTTGTGTGCCAAGTGTGCTGCTCACTCCATTGCTGCTCCCATCATCAAAGAACTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGACATGGCTCTTTACGGTGAGAAAGAGTGGTACTTTTTCTCCCCTCGAGACCGAAAATACCCAAACGGTTCACGACCCAACCGGGCGGCTGGAACCGGATACTGGAAGGCCACCGGAGCGGATAAGCCGATTGGAAAACCGAAAGCTCTTGGAATTAAGAAAGCCCTTGTGTTCTACGCGGGGAAAGCCCCAAAAGGAGTGAAGACCAATTGGATCATGCACGAATATCGCTTAGCCAACGTCGATAGATCTGCCTCCAAGAAAAACAACAATTTGAGGCTTGATGATTGGGTGCTATGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAGTACAATAATGGCGATGCCGTGGTGGATCAGAAACCGGCGAATTTACCAGAAGAGGTTTTGTTCCAGCCCGAGATGAAGCCTGACATCAAGATGTACGGCCACGATCATTTCTGGAACAGCCAATTGTACATGAACACGTCGGATTCGGTGCCGAGGTTAAATACAGACTCTAGCTGCTCGGAGCACGTGGTTTCGCCGGACGGCACCTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAACGACCTCGAGTTGGGCCCGGACCTGGTTTCGGGCTACGATTTTAATTTCATGGAGCTGTCGACAGATGACGCTTTTGCCCCTCAAACCCAATACCAAATGAACCAGCCCCCGTGGCTGGATATGTTCGCGTACCTTCCGAAGACATTTTAA 1206 0.4834 MGSTEEIKVKGERIGLWIEGGVGKLKKKREEDKKLKKKKADQVRSLKDLSTLRTALLQARVKINPFWLPIKLNLTFLFSSLSLSSNTTTILKGRRNTVRNQSREKPRMQGQLELPPGFRFHPTDDELVNHYLCAKCAAHSIAAPIIKELDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNNGDAVVDQKPANLPEEVLFQPEMKPDIKMYGHDHFWNSQLYMNTSDSVPRLNTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDLVSGYDFNFMELSTDDAFAPQTQYQMNQPPWLDMFAYLPKTF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03127 401 FunFam NAC transcription factor 123 269 - -
Phco4g03127 401 ProSiteProfiles NAC domain profile. 114 265 IPR003441 GO:0003677|GO:0006355
Phco4g03127 401 Gene3D NAC domain 123 270 IPR036093 GO:0003677|GO:0006355
Phco4g03127 401 Pfam No apical meristem (NAM) protein 115 238 IPR003441 GO:0003677|GO:0006355
Phco4g03127 401 PANTHER NAC TRANSCRIPTION FACTOR 56 114 311 - -
Phco4g03127 401 SUPERFAMILY NAC domain 107 265 IPR036093 GO:0003677|GO:0006355
Phco4g03127 401 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03127 Phco-Chr4 52106717 52109814 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g03127 NAM 1.4e-37 No_clan