Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03106 ATGATGGCTTGTGGAACTGATCTCAACCTTCCTCCTGGCTTTTCCTTCTCTCCAACTGATGAACAACTTCTCCTTCATTTTCTTTATCCCAAGACCTCTCTACCATCTCATCCCAGCATCATTCCAGACCTTGACCTCTCTCTGCATGATCCATGGCAGCTAAATGGTAAAGCGTTGTCAAGTGGAAATCAACACTATTTCTTCAGCAGAGCGAAGGAAAACAGATCCACAGAAAATGGGTATTGGAAGGAAATAGGAGTGACAGAAGCAGTAGTATCCGCATCTGAAAAAGTGGGGATGAAGAAGTACCTTGTGTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGGTCATGCAAGAGTTTCATATTTGCTCATCCAGTTTTAGCACTGCAAGTACTCGCGGAAGAAGAAAATCTGATCAATGTAGGAGCAAATGGGTTTTGTGCAAAGCCTATGAGAAGAAAAGTTCTGAATCTGAAGAAGGTGTAAATTGTTACAACGATGAGAATGACAGTGGAACTGAGCTTTCATGGCTAGATGAATTTTATATGTCATTAGATGAAGATGTTGAAGAAGTTATGAGTCTTCCTAATTAG 606 0.4158 MMACGTDLNLPPGFSFSPTDEQLLLHFLYPKTSLPSHPSIIPDLDLSLHDPWQLNGKALSSGNQHYFFSRAKENRSTENGYWKEIGVTEAVVSASEKVGMKKYLVFNLGEAPQGTETSWVMQEFHICSSSFSTASTRGRRKSDQCRSKWVLCKAYEKKSSESEEGVNCYNDENDSGTELSWLDEFYMSLDEDVEEVMSLPN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03106 201 ProSiteProfiles NAC domain profile. 10 157 IPR003441 GO:0003677|GO:0006355
Phco4g03106 201 PANTHER NAC TRANSCRIPTION FACTOR 56 10 172 - -
Phco4g03106 201 Pfam No apical meristem (NAM) protein 11 126 IPR003441 GO:0003677|GO:0006355
Phco4g03106 201 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Phco4g03106 201 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03106 Phco-Chr4 51971470 51972391 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g03106 NAM 1.1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03106 4 51971470 51972391 Phco4g03106 4 51971470 51972391 ECH