Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03095 ATGCCGGCGTGGTGGAGTAGAAAGTGGAGCAAGACCAAGGAGGACCACGAGGAGGCCGAGGAGGAGGAAGAGGAAGAGCCACGTGGTGGGTTTCAGTTGAATTTCATGAAATCTCCGGTCGCCGTTCGCAGGGGTCACCTCAGTAAGAGTAAGAAGAACAAGAAGAAGCCCAAGAGCTTCGACGACAAGCTCAAAGGGGTTCCGTTGCCTCGTCCCACGCACACTCACACCGATCAAATTCAGACGTTTGGATCTCTCTCGGTGTCGGGTTCCAGCGTCAGCTCCTCCACCTCCTTCGACGATCTCCCAATTTCGCCTCACTTTAATGCCAACAGAGGACAAGATGAGGTGAGGTTCAATGTGAGGTCAAAAAGTCCTGGTCCTGGGTCAAGAGGACCTACTAGTCCTACCTCACCGCTTCATCCAAGGCTGCATGCTTTGAGTCTTGACTCTCCTACGGGGAAGCAAGACGAGAGAAGGAGTGAGTGTCATCCGTTGCCTCTTCCTCCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAATTCCCTCACACGACCAAATGGACTGTTGGAAAATGCTACCAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCATGTGTATCTGGGATTCAATAGTGAAAATGGGCAGATGTGTGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAGCTTTCACACCCTAATATTGTTCAATACTATGGGAGTGAACTGGTAGAAGAATCACTTTCGGTATATTTGGAATTTGTCTCTGGTGGTTCTATCCAAAAGTTACTTCAGGAGTATGGTCCATTTAAGGAACCTGTTATTCAAAATTATACCAGGAAGATTGTCTCTGGACTTGCCTATCTGCATGCAAGAAATACGGTTCACAGGGATATTAAAGGGGCAAACATTCTAGTTGATCCTAATGGTGAAATCAAATTGGCTGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAACACAAATGGCTATAGTCTTCCGGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCGTGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCCGAAATCCCTGAGCATCTTTCCAGTGATGCAAAAAATTTCATCAAGTTGTGTTTACAAAGAGACCCATCAGCTCGCCCGACAGCCCAAAAGTTACTAGACCACCACCCCTTCATTCAAGATCAATCAGCAACAAAAGCTGCAAATGTCAGCATAACCAGAGATGCTTTCCCTTATGTGTTTGATGGAAGCCGGACACCGCCTGTGTTAGAGTCCCATTCGAACCGAACAAGTATAACTTCCCTCGATGGAGATTATGCGTCAAAGCCAGCTCTTGCAGCCCCACGTGCATTAAGAAGTCCAAGGGATAACACAAGAATGATTACATCTTTACCTGTATCTCCCTCTTCAAGTCCATTGCGACGGTATGGGCCAACGCACCAGAGCTGTTTCTTTTCTCCTCCTCATCCAGCTTACACAATAATGGGACAAAGTAGTTACACTTTGAATAATGACGTATGCTCGTTTCCCGTAAGGTCAAATGCCACGTTGACTCTTGATCCTTGGCATGAAACATCTCGGTACAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA 1830 0.4568 MPAWWSRKWSKTKEDHEEAEEEEEEEPRGGFQLNFMKSPVAVRRGHLSKSKKNKKKPKSFDDKLKGVPLPRPTHTHTDQIQTFGSLSVSGSSVSSSTSFDDLPISPHFNANRGQDEVRFNVRSKSPGPGSRGPTSPTSPLHPRLHALSLDSPTGKQDERRSECHPLPLPPGSPTSPSSVLSNSLTRPNGLLENATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLSVYLEFVSGGSIQKLLQEYGPFKEPVIQNYTRKIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSSDAKNFIKLCLQRDPSARPTAQKLLDHHPFIQDQSATKAANVSITRDAFPYVFDGSRTPPVLESHSNRTSITSLDGDYASKPALAAPRALRSPRDNTRMITSLPVSPSSSPLRRYGPTHQSCFFSPPHPAYTIMGQSSYTLNNDVCSFPVRSNATLTLDPWHETSRYKANTPPGGSPRMRLI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03095 609 Pfam Protein kinase domain 202 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03095 609 MobiDBLite consensus disorder prediction 74 104 - -
Phco4g03095 609 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 466 - -
Phco4g03095 609 Gene3D Transferase(Phosphotransferase) domain 1 198 477 - -
Phco4g03095 609 Coils Coil 6 26 - -
Phco4g03095 609 FunFam Mitogen-activated protein kinase kinase kinase 199 482 - -
Phco4g03095 609 CDD STKc_MEKK1_plant 200 458 - -
Phco4g03095 609 ProSiteProfiles Protein kinase domain profile. 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03095 609 MobiDBLite consensus disorder prediction 55 69 - -
Phco4g03095 609 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524
Phco4g03095 609 SUPERFAMILY Protein kinase-like (PK-like) 199 545 IPR011009 -
Phco4g03095 609 SMART serkin_6 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03095 609 MobiDBLite consensus disorder prediction 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03095 Phco-Chr4 51906559 51911692 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g03095 Pkinase 1.3e-73 CL0016