Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03077 ATGGCAGCTAAATGCAGAGCGAAGGAAAACAGATCCACAGAAAATGGGTATTGGAAGGAAATAGGAGTGACAGAAGCAGTAGTATCCGCATCTGAAAAAGTGGGGATGAAGAAGTACCTTGTGTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCCGTTGGGTCATGCAAGAGTTTCATATTTGCTCATCCAGTTTTAGCACTGCAAGCACTCGCGGAAGAAGAAAATCTGATCAATGTAGGAGCAAATGGGTTTTGTGCAAAGCCTATGAGAAGAAAAGTTCTGAATCTGAAGAAGGTGTAAATTGTTACAACGATGAGAATGACAGTGGAACTGAGCTTTCATGGCTAGATGAATTTTATATGTCATTAGATGAAGATGTCGAAGAAGTTATGAGTCTTCCTAATTAG 414 0.4106 MAAKCRAKENRSTENGYWKEIGVTEAVVSASEKVGMKKYLVFNLGEAPQGTETRWVMQEFHICSSSFSTASTRGRRKSDQCRSKWVLCKAYEKKSSESEEGVNCYNDENDSGTELSWLDEFYMSLDEDVEEVMSLPN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03077 137 Pfam No apical meristem (NAM) protein 7 62 IPR003441 GO:0003677|GO:0006355
Phco4g03077 137 ProSiteProfiles NAC domain profile. 1 93 IPR003441 GO:0003677|GO:0006355
Phco4g03077 137 PANTHER NAC TRANSCRIPTION FACTOR 56 7 108 - -
Phco4g03077 137 Gene3D NAC domain 2 98 IPR036093 GO:0003677|GO:0006355
Phco4g03077 137 SUPERFAMILY NAC domain 8 93 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03077 Phco-Chr4 51758469 51759220 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g03077 NAM 3.4e-08 No_clan