Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03058 ATGACGTTTAATGATTTTTGCGTTTTCGTTTCAATTGTTTGTGCGAGAATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCCGTTGCGAGCACCGAACCATCGCACCCCAACCAAAAACCTACCAAGCCATTCCTCTTCGTCACCGTTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCCGAACCCTTCAAATCGCTCCTATTCTGGCTCGCGCTCTCTCTCCTCATCGGTCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACGTCCGTGTCGGCCTCGGCGAGGTCGTCAACTTTCCTGATCCGGAGCCCGAAACGGACGACGACGCTAAGAAGCCTCCGCAGCGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGTCCGGTGGTGTTAGTCGGCGCGGCGGAGAAGAGAGGAGGAGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGAGTGGAGCGAGGAGGATGTGGAGGTGCTGAAGAAGCAGTTGGTGAAGAATCCGGTGGGGATGCCGGGACGGTGGGAGGCGATAGCGGCGGCGTTCGCCGGAAGGCACGGTGTGGAGAGTGTGATAAAGAAGACAAAGGAGTTGGGGGAGAAGAAAGTGGACGATTCGGAATCTTATGCATTGTTCTTGAAGAAGAGGAAGGCGTTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGATTCGATGACCGTGGAGAAAGCTGTTGAGAATGGTTGGAGTTCTGGTGAGGATATCGCTTTGCTGAATGCATTGAAAGCGTTTCCTAAGGATATTTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGTAGATCCAAAGCGGCTTGCATGAGAAGAGTTGCTGAATTGAAGAAAGGATTTCGGAGCTCAAAAGCTGCAGCCGAGTGA 963 0.5597 MTFNDFCVFVSIVCARMEFLDEDARPRFVFQSGAVASTEPSHPNQKPTKPFLFVTVSLSSLFLALSLFFLESEPFKSLLFWLALSLLIGPFAPPSLTGGDVRVGLGEVVNFPDPEPETDDDAKKPPQRRSRQRRPEEVAAIGPVVLVGAAEKRGGGGGGVEKVSTVVEEKEWSEEDVEVLKKQLVKNPVGMPGRWEAIAAAFAGRHGVESVIKKTKELGEKKVDDSESYALFLKKRKALDKRVVEENGGEDSMTVEKAVENGWSSGEDIALLNALKAFPKDISMRWEKVAAAVPGRSKAACMRRVAELKKGFRSSKAAAE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03058 320 CDD SANT 263 304 IPR001005 -
Phco4g03058 320 SMART sant 168 221 IPR001005 -
Phco4g03058 320 SMART sant 259 311 IPR001005 -
Phco4g03058 320 Gene3D - 166 224 - -
Phco4g03058 320 MobiDBLite consensus disorder prediction 116 136 - -
Phco4g03058 320 Gene3D - 256 320 - -
Phco4g03058 320 ProSiteProfiles Myb-like domain profile. 255 304 IPR001005 -
Phco4g03058 320 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 165 318 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Phco4g03058 320 SUPERFAMILY Homeodomain-like 170 209 IPR009057 -
Phco4g03058 320 MobiDBLite consensus disorder prediction 107 136 - -
Phco4g03058 320 SUPERFAMILY Homeodomain-like 260 307 IPR009057 -
Phco4g03058 320 FunFam Myb family transcription factor 257 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03058 Phco-Chr4 51562332 51563294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco4g03058 None None None