Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03057 ATGGATTATGAGCAATTTGATTTCTCATTTGGCCCTCCTTACATGAACCAACTCCATGAGTATTGCTTAGAAAATGCATTCCCATTCCAAACAGAAGATATATCATCACCAAATACCATCCTGGATGAAATGTTTGGTCAAGAGTCTGTGGAGGGCTTGCTTCTGCAACACACAAACAACCAGGACTTTGGTTTTATGAATCATAATGATCCACTAGAGATTGAATTCTGTGATGGATTTGCCCCTAGTTCTGAGGAAAATGTGCATGTTTCAATGGAAGAAGGGGATTCTTATTTGAAGGGAATCCAAGCAGAGCTAATGGAACCGACTAGTTTAGCTGATCTTTTGTTAACAGGAGCTGAAGCTGTTGAAGCACACAACTGGGCTCTTGCTTCAGAGATAATTGAGAAACTTAATAAGGCATCATCTTTAGAAACCGGTGATGGTTTGTTGAACAGGTTGGCTCTTTTCTTTACTCAGGGTCTGTATTATAAAAGTACAAATGCCCCTGAACTGTTGCAACGTGGTGCTGTTTCTACACACACAAATGCTTTCTGTGTGTTTCAGGTTCTCCAAGAACTCTCACCCTATGTGAAATTTGCTCATTTCACCGCAAACCAAGCAATCTTAGAAGCCACGGATGGTGCTGAGAATGTTCACATCATTGATTTTGACATAATGGAGGGAATCCAGTGGCCACCCTTGATGGTTGACCTTGCAATGAGGAAAAGTACTACTTCCCTTAGAGTATCAGCCATCACAGTGGACCAGAGAGGTGCTGCTTCTGCTCAACAAACAGGAAGAAGACTCAAAGAGTTTGCAGCTTCTATCAACTTTCCATTTGTGTTTGATCAAATCATGATGGAAAGAGAAGAAGATATTCAAGGAATTGAACTTGATCAAACACTCGTTGTCAACTGCATGATACACCAGTGGATGCCCAATAGGAGCTTCTCACTGGTCAAAACCTTTTTGGATGGTGTAACCAAATTGTCCCCAAGGCTTGTGGTTTTAGTGGAAGAAGAACTATTTAATTTTTCTAGGCTCAAATCCATGTCCTTTGTGGAGTTCTTCTGTGAGGCTTTGCATCACTACACTGCACTTTGTGATTCACTTGCTAGTAGTCTATGGGGTAGCCACAAGAAGGAGATGACCCTGATAGAGAAAGAGATTTTGGGGCTTAGAATCTTGGACAGTGTGAGGGAGTTTCCTTGTGAGAGAAAGGAGAGAAAGGTTTGGGAGGAAGGGTTTTATTCCTTGAAAGGGTTTAGATGTGTTCCTATGAGTACATGTAATATTTCACAAGCCAAGTTCTTGGTAAGCCTCTTTGGTGGAGGGTATTGGGTCCAATTCGAGAAGGGTAGGTTGGCCTTGTGTTGGAAGTCAAGGCCTTTGACTGTGGCTTCAATCTGGGTACCAAAGGGTTATTCGAGTGACAAAGTCAAATAG 1449 0.4196 MDYEQFDFSFGPPYMNQLHEYCLENAFPFQTEDISSPNTILDEMFGQESVEGLLLQHTNNQDFGFMNHNDPLEIEFCDGFAPSSEENVHVSMEEGDSYLKGIQAELMEPTSLADLLLTGAEAVEAHNWALASEIIEKLNKASSLETGDGLLNRLALFFTQGLYYKSTNAPELLQRGAVSTHTNAFCVFQVLQELSPYVKFAHFTANQAILEATDGAENVHIIDFDIMEGIQWPPLMVDLAMRKSTTSLRVSAITVDQRGAASAQQTGRRLKEFAASINFPFVFDQIMMEREEDIQGIELDQTLVVNCMIHQWMPNRSFSLVKTFLDGVTKLSPRLVVLVEEELFNFSRLKSMSFVEFFCEALHHYTALCDSLASSLWGSHKKEMTLIEKEILGLRILDSVREFPCERKERKVWEEGFYSLKGFRCVPMSTCNISQAKFLVSLFGGGYWVQFEKGRLALCWKSRPLTVASIWVPKGYSSDKVK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03057 482 Pfam GRAS domain family 113 471 IPR005202 -
Phco4g03057 482 ProSiteProfiles GRAS family profile. 103 472 IPR005202 -
Phco4g03057 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 95 467 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03057 Phco-Chr4 51558720 51560168 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco4g03057 GRAS 3.7e-79 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03057 4 51558720 51560168 Phco4g03057 4 51558720 51560168 ECH