Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03030 ATGGGATGCCTTAACTCCAAATATTCTTCTCATCGGAACGCTGAGAGAAGACTGAAAGGAGAGAAAGAATATGCAACAAAATCATTGACGCACAACCACAACAAGGACCATTCATATAACAGGTTGAAAGAAGAGATAGAAAGAGTAGTATCCAATGAAAAAGAAAGGGATAATAGTAATAGTGAGATAAAGGGTGTTCCTAGAAACGATAACAAGAGTGATGAGGTTGGTGAGAATGTTCCTCAGAGATCTCAGGAAAAGAAGAATATTGTTGCAAACTCTGAGTTTTTTGTGGAGGGTTGGCCAAAATGGTTAGTTGATAATATCCCACCAAACGTGTTGGATAGCTTGGTTCCCAAGAGTGCTGATTCCTATGAAAAACTTGGAAAGGTGGGGCATGGAACATATAGCAATGTATACAAAGCCCGAGATAAGGAGAGTGGAAAGATTGTTGCTTTGAAGAAGGTAAGGTTTGACACATCAGATCCTGAAAGCATAAAGTTTATGGCGAGAGAGATACTGATACTGCAGAAGCTGGATCATCCCAATGTCATCAAACTACAAGGGCTTGCAACATCACGGATGCAGTATAGTCTTTATCTTGTTTTTGATTACATGCATTCTGACCTTACAACAATTATCTCTCGCCCCAGGGACAAACTCACTCAACCAAAGATCAAGTGTTATATGCAACAACTGCTTCTGGGGCTCCAGCATTGTCATGAGAGAGGAGTTATGCATAGAGATATAAAACCTTCCAACTTGTTAGTAGACAAAAAAGGGGTGCTAAAAATTGCAGATTTTGGGCTAGCAAATTCTTTTGCTATCAAACCTGAAGGGCCTTTCACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACTGATTATGGATATGAAATTGATCTCTGGAGTGCAGGATGCTTATTGGCTGAGATGCTCCTTGGAAGGCCACTTATGCCAGGAAGAACAGAGGTTGAACAACTTCACATGATCTTCAAACTTTGTGGTTCACCTTCTGCGGATTATTGGATGAGAATGAAGCTAGTGACAAGCTTATTTCCACCACTTCATTACAAAGCTAATTATGATGAAAACTTTAAGGATTTTCCTCCCTCTGCTTCTGCTCTCTTGACTACACTTCTTCATCTAGACTCTAATGCACGTGCCACAGCCGCTTCTGCACTTCAAAGCCAATTTTTCAAGTCAAGTCCATTGGCATGCGACGTTTCAGCTTTAGCTGTACCATACAAAGACGAAGATGAATACTCACAAACAAAAAGACGCAAACGGCGAAAGGGTATGAAAAACAAAGGGCATTTATTTCAAACAAGTACATGCAATATGAACCAATCAGGAAGGAACAATACTTCTGAACAAAGCAGGAGAGATTCAGAATCATCCAAAGAGAAGAGTGTGGCACAAGACATGGAAGGTGAAGAAATTGGAAAAAGTGAAAGCAATAGAAGGTCAGTTTTTATGAAGGAGAGGAGTATGAGCATGAATGAATGTATATCCCCAGTTTTTGTGTCTGGTGTGAGAAAATCACCTAAAACAGAGGGCCATCCGAATGCTCTTAAGAACATAAAAAACTATGCCCTCTTACAAGCCTCAATAATTGATATGATCAATCGCAATGAAGGCAATGAAATTGGTCCATTGCGAAAGTCCTTTTCTGCCTTGGATTTTAGCCTTCATTCTGACAAACTATCAAGCCTCTACTCCCAGTCAAGAAATTGA 1758 0.4005 MGCLNSKYSSHRNAERRLKGEKEYATKSLTHNHNKDHSYNRLKEEIERVVSNEKERDNSNSEIKGVPRNDNKSDEVGENVPQRSQEKKNIVANSEFFVEGWPKWLVDNIPPNVLDSLVPKSADSYEKLGKVGHGTYSNVYKARDKESGKIVALKKVRFDTSDPESIKFMAREILILQKLDHPNVIKLQGLATSRMQYSLYLVFDYMHSDLTTIISRPRDKLTQPKIKCYMQQLLLGLQHCHERGVMHRDIKPSNLLVDKKGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMLLGRPLMPGRTEVEQLHMIFKLCGSPSADYWMRMKLVTSLFPPLHYKANYDENFKDFPPSASALLTTLLHLDSNARATAASALQSQFFKSSPLACDVSALAVPYKDEDEYSQTKRRKRRKGMKNKGHLFQTSTCNMNQSGRNNTSEQSRRDSESSKEKSVAQDMEGEEIGKSESNRRSVFMKERSMSMNECISPVFVSGVRKSPKTEGHPNALKNIKNYALLQASIIDMINRNEGNEIGPLRKSFSALDFSLHSDKLSSLYSQSRN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03030 585 FunFam Mitogen-activated protein kinase 206 423 - -
Phco4g03030 585 MobiDBLite consensus disorder prediction 426 496 - -
Phco4g03030 585 PANTHER CELL DIVISION PROTEIN KINASE 123 412 - -
Phco4g03030 585 Gene3D Transferase(Phosphotransferase) domain 1 208 448 - -
Phco4g03030 585 Pfam Protein kinase domain 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03030 585 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Phco4g03030 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Phco4g03030 585 Gene3D Phosphorylase Kinase; domain 1 114 207 - -
Phco4g03030 585 FunFam probable serine/threonine-protein kinase At1g54610 112 207 - -
Phco4g03030 585 SMART serkin_6 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03030 585 ProSiteProfiles Protein kinase domain profile. 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g03030 585 SUPERFAMILY Protein kinase-like (PK-like) 120 412 IPR011009 -
Phco4g03030 585 MobiDBLite consensus disorder prediction 1 85 - -
Phco4g03030 585 MobiDBLite consensus disorder prediction 465 496 - -
Phco4g03030 585 MobiDBLite consensus disorder prediction 10 82 - -
Phco4g03030 585 MobiDBLite consensus disorder prediction 445 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03030 Phco-Chr4 51367978 51371518 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco4g03030 Pkinase 7.7e-70 CL0016