LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco4g03011	ATGGATTTCTTCTACTTTGGAAACCCTCACCCTTCTCATGATCATCTTCATAACATGCCACCATCTTCCCCTGAGATCGCACTCTCTGATTACCTCCTTCTCGATGATTTCCTTGATCATCATCATGGACACTCTCTATCATCACAAAGCACTGAATCATCGGAAAAAGCAACTTTCACTGATTCCACTCATGGATTCACCACTGGTGCAACCTCTAAGAACAACACCAACAACAACATAAAGTGCAAGAACGGGATTAGTGAAAGCAAAGCACGGTTGGGTCCAAGAATCGCGTTTAGAACTAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAATACCAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATGAGAGCCCTTTTACCACATACTACAGCCCCATCTCCTTCTTACATTCGGATGATTCTACATGTTCCAAATGA	567	0.4268	MDFFYFGNPHPSHDHLHNMPPSSPEIALSDYLLLDDFLDHHHGHSLSSQSTESSEKATFTDSTHGFTTGATSKNNTNNNIKCKNGISESKARLGPRIAFRTKSELEIMDDGYKWRKYGKKSVKSNTNLRNYYKCSSGGCSVKKRVERDREDSSYVITTYEGVHNHESPFTTYYSPISFLHSDDSTCSK	188

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco4g03011	188	Gene3D	WRKY domain	94	169	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Phco4g03011	188	MobiDBLite	consensus disorder prediction	44	83	-	-
	Phco4g03011	188	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	15	170	IPR044810	GO:0003700
	Phco4g03011	188	SUPERFAMILY	WRKY DNA-binding domain	100	168	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Phco4g03011	188	MobiDBLite	consensus disorder prediction	47	83	-	-
	Phco4g03011	188	Pfam	WRKY DNA -binding domain	109	166	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco4g03011	188	SMART	WRKY_cls	108	167	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco4g03011	188	ProSiteProfiles	WRKY domain profile.	103	168	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phco4g03011	188	FunFam	WRKY transcription factor 57	94	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco4g03011	Phco-Chr4	51182827	51183885	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Phco4g03011		WRKY	1e-21	CL0274

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g03011	4	51182827	51183885	Phco4g03011	4	51182827	51183885	ECH