Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02969 ATGGTGGAGATTCACGAACACATCAACCCCTTTGATGAAGAAAATGAAGAAGAAGAAGAAGAGATCAACTATGACCAGCTTAAGAAGAGAATGTGGAAGGACCGCATCCTGCTGCAGAAGCTAAAGGAGAATCGCCCCAAAGAAGAGTCAGACCAAGAAGCGAAACAAGAAGCTTGTAGGCGGAAGAAGATGTCAAGAGCACAAGATTCAATCCTCAAATACATGGTGAAGATCATGGAAGTTTGCAACGCTCAAGGTTTTGTGTATGGGATTATCCCTGAGAAGGGTAAGCCAGTGACAGGCTCTTCTGACAGCTTACGTGAGTGGTGGAAAGAAAAGGTCAAATTTGATCAAAATGCTCCAACTGCCCTTGCAAAATTCATGCCGCTCCTTCAAATAGAAGATTCGGATTCAACTTCCTACATACATCTCCTTAATGACTTGCAAGACACTACTTTGAGTTCACTCCTTTCTGCTCTCATGCAACATTGTATACCTCCCCAAAGAAGATTCCCTCTTGAGAGAGGCTTTGCTCCACCCTGGTGGCCAACAGGGACAGAAGCTTGGTGGGGTGAACAAGGTCTTTTGGCCCAAGAACACGGGCCACCTCCTTATAAGAAGCCTCATGACCTCAAAAAGGTTTGGAAAGTCTCTCTCCTGGCTGCAGTTATCAAACACATATCTCCTAATTTGGATAAACTTAGAAGGTTGGTGACTCAGTCCAAAACTTTGCAAGACAAAATGACAGCCAAGGACACAGCAACTTGGTCCAAGGTTATGAACCAAGAAGAAGCTCTGTTGCAACTAACCAAAAAGTGCCTCAAAATATCTCAATTAGAGGAAGATGAAAATGAATGTGAAAGCTCCACTAGCACTTCCCGTGAAGGGAGTTGTGTAGCTGAGTTGAATGATGACTCCAATTTAGGTGGTGGGATCATTGAGAAAAGGAAGAGTGTGATTGACTTAGATGCTACTACTGATAAGCTATATGCTTGTCAATACTACCAGTGTCCACAAAGTGAAATGGGTATGGGATTTCTGGACAAAAACTCAAGGATGAACCATGAGTCCCATTGTGGTTATCGCAACAATCAAAACCCTACTCTCCTTCATGATCCTGTGTCCAATGACACACAAATTATATGTGAGGATGATTGGATGAATATGGAAGTGGCAAGAGCTAATCAGAATGATAATGACCATTTTGGAGATCTAAATGATCAAGTGAGAGATATTGTAGGAAAGACACCAGAAGATTATGGAAGCTTATGGCTAAATTCCCTTGAAGATCTTGAATTGCACACTGCACTGGATCAGATCGACATGAACTTGAATCGAAATTCAGAGCAAGATACACCACAAGGCCAAGAAATAACCTCAATTTGGGACTTAACCTACAAATAG 1404 0.4231 MVEIHEHINPFDEENEEEEEEINYDQLKKRMWKDRILLQKLKENRPKEESDQEAKQEACRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIIPEKGKPVTGSSDSLREWWKEKVKFDQNAPTALAKFMPLLQIEDSDSTSYIHLLNDLQDTTLSSLLSALMQHCIPPQRRFPLERGFAPPWWPTGTEAWWGEQGLLAQEHGPPPYKKPHDLKKVWKVSLLAAVIKHISPNLDKLRRLVTQSKTLQDKMTAKDTATWSKVMNQEEALLQLTKKCLKISQLEEDENECESSTSTSREGSCVAELNDDSNLGGGIIEKRKSVIDLDATTDKLYACQYYQCPQSEMGMGFLDKNSRMNHESHCGYRNNQNPTLLHDPVSNDTQIICEDDWMNMEVARANQNDNDHFGDLNDQVRDIVGKTPEDYGSLWLNSLEDLELHTALDQIDMNLNRNSEQDTPQGQEITSIWDLTYK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02969 467 FunFam Ethylene insensitive 3 family protein 53 134 - -
Phco4g02969 467 Pfam Ethylene insensitive 3 26 264 IPR047091 GO:0003700
Phco4g02969 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 7 367 IPR006957 GO:0003700|GO:0005634
Phco4g02969 467 SUPERFAMILY DNA-binding domain of EIN3-like 142 267 IPR023278 GO:0003700|GO:0005634
Phco4g02969 467 MobiDBLite consensus disorder prediction 446 467 - -
Phco4g02969 467 Gene3D - 134 273 IPR023278 GO:0003700|GO:0005634
Phco4g02969 467 Gene3D - 53 130 IPR023278 GO:0003700|GO:0005634
Phco4g02969 467 FunFam Ethylene insensitive 3-like 1 136 273 - -
Phco4g02969 467 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02969 Phco-Chr4 50841295 50842698 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Phco4g02969 EIN3 1.1e-114 No_clan