Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02937 ATGCCAAACACCACTCAACATTTCCCAAACAACAACAACATCAACTTCCACAAAGATCCCCTGCATGTTTCCCTTCGCAACCTCTCCCAACTCAGCACCCGAATGGATTCGCTTCAAACCTTCGTCTCCCAATCCATTCAATCCCACACTCTCCTCACACACCACCAAATGAACATAGTATCCAACGAGATCCTAACCGCAATTCGCCACGTCATCACCAACGGCGCAGCCTTAGTCGCAGCCTCCGAGAACGTGCTTCCGCTTTCGGACACTCCAACGTCGGACTCTCCCAACCTAAACAGCGACGAAACAAGCGTGGTGGAGCTGGACGCGATGGAACTCCTGGTGCAGCACCTCCATTTCTGCGAGGTGTGCGGGAAGGGCTTCACGCGCGACGCGAACCTTAGGATGCACATGCGCGCCCACGGGGACGAGTTCAAGACTCCGGACGCGCTTGTCAGCAGGGCGCGTGGCGAGACGCGCACGAAGGCGACGCGGTTCTCGTGCCCCTTCGAAGGATGCAACCGCAACAAGACGCACAAGAAGTTCAGGCCGTTGAAGTCGGTGTTGTGTCTGAGGAACCACTTCAAGAGGAGCCACTGTCCAAAAACGCTGTCGTGCGAGCGTTGTCGGAAGAAGAGCTTCGCGGTGCTCTCAGACTTGAGGAGTCACGTGAAGCAGTGTCGGGGAGAGGCCACGTGGAAGTGCTCGTGCGGAACCACGTTTTCGCGGAAGGACAAGTTGTTCGGACACGTGGCGCTGTTCGAGGGGCACTTGCCGATGCTTGAAGTGGAGAAGGAGACATCTGTGGTGGCGGCGGCGGCGGCGGATGGGTTGGTGAAGGAAAATGACGGTGGTTTGGATGGGTTACCTGAAGGGTTCTTTGATGGGTTGGATGAATTTGGGTTTGGTTCCTCTGAAATCATCTCTTCACCGGAGGAAACTTGGCCGGCATTGAGGCTTCCCACAAATAATTTAAATGGAAACTCTCATTTTTAA 999 0.5506 MPNTTQHFPNNNNINFHKDPLHVSLRNLSQLSTRMDSLQTFVSQSIQSHTLLTHHQMNIVSNEILTAIRHVITNGAALVAASENVLPLSDTPTSDSPNLNSDETSVVELDAMELLVQHLHFCEVCGKGFTRDANLRMHMRAHGDEFKTPDALVSRARGETRTKATRFSCPFEGCNRNKTHKKFRPLKSVLCLRNHFKRSHCPKTLSCERCRKKSFAVLSDLRSHVKQCRGEATWKCSCGTTFSRKDKLFGHVALFEGHLPMLEVEKETSVVAAAAADGLVKENDGGLDGLPEGFFDGLDEFGFGSSEIISSPEETWPALRLPTNNLNGNSHF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02937 332 FunFam B-cell CLL/lymphoma 6, member B 119 142 - -
Phco4g02937 332 Gene3D Classic Zinc Finger 159 256 - -
Phco4g02937 332 SUPERFAMILY beta-beta-alpha zinc fingers 119 144 IPR036236 -
Phco4g02937 332 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 94 269 IPR044300 GO:0010044|GO:0010447
Phco4g02937 332 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Phco4g02937 332 Gene3D Classic Zinc Finger 120 142 - -
Phco4g02937 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Phco4g02937 332 SMART c2h2final6 120 142 IPR013087 -
Phco4g02937 332 SMART c2h2final6 167 200 IPR013087 -
Phco4g02937 332 SMART c2h2final6 205 226 IPR013087 -
Phco4g02937 332 Pfam Zinc-finger of C2H2 type 121 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02937 Phco-Chr4 50542968 50543966 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco4g02937 zf-met 0.0014 CL0361