Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02922 ATGGAACGGTATGAGATAATCAAAGATATTGGGTCAGGTAACTTTGGTGTGGCAAAGCTGGTCAAGGAAAAATGGACTGCTCAATTATACGCTGTCAAGTTCATTGAGAGAGGCTTCAAGATTGATGAGCACGTGCAAAGAGAGATTATAAATCATAGGTCCTTGAAGCACCCCAATATCATTAGATTCAAAGAGGTGTTACTCACTCCAACTCATCTTGCAATAGTCATGGAATATGCTGCCGGGGGAGAACTGTTTGAAAGAATATGCAGTGCTGGGAGATTCAGTGAGGACGAGGCAAGATATTTCTTTCAGCAATTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGGGATCTTAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCACGACTTAAAATATGTGACTTTGGTTACTCAAAGTCATCTGTTCTGCACTCCCAGCCAAAATCTACTGTAGGAACCCCTGCCTATATAGCACCAGAGGTTTTGTCAAGAAGAGAATATGATGGGAAGGTCGCAGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGTTGGTTGGTGCATATCCTTTTGAAGACCCAGAAGATCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGTGTCCACTATTCTATTCCAGACTATGTACGTATCAGTAAAGAGTGTAGGCACCTTTTGTCTCGAATATTTGTGGCCAACCCAGAAAAGAGAATTACCATACCCGAGATAAAAATGCACCCTTGGTTCCTAAAGAACTTGCCACTAGAATTTATGGATGAGGGAGAAGGGGTGTTGCAGAATGACATGAATGAATCGTGTCAAAGCATTGAAGAAATACTGTCAATAATTCAAGAGGCTAGGAAACCGGGTGAGGGCCCAAAAGTTGGTGAGCAATTTGTTGGGGGGAGCATGGACCTTGATGATATTGATGCAGATGCTGACATCGATGATATTGAGACAAGCGGTGATTTTGTCTGTGCTTTGTGA 1020 0.4216 MERYEIIKDIGSGNFGVAKLVKEKWTAQLYAVKFIERGFKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDEGEGVLQNDMNESCQSIEEILSIIQEARKPGEGPKVGEQFVGGSMDLDDIDADADIDDIETSGDFVCAL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02922 339 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02922 339 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Phco4g02922 339 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Phco4g02922 339 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02922 339 PANTHER SERINE/THREONINE KINASE 2 271 - -
Phco4g02922 339 SUPERFAMILY Protein kinase-like (PK-like) 2 267 IPR011009 -
Phco4g02922 339 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Phco4g02922 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Phco4g02922 339 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Phco4g02922 339 CDD STKc_SnRK2 3 259 - -
Phco4g02922 339 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02922 339 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02922 Phco-Chr4 50447385 50450064 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phco4g02922 Pkinase 1.4e-71 CL0016