Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02869 ATGTTAGAGACTGGTGGTGGTGGTGAACGTCATTCCGAGGCCAGTTCGGAGACTCTCAATTCTTCCATGCTTGGAAGCTCCATGAGTAGCGAGAGCATTTGCAGCACCAGTTTCAGCCGTCTTTCCTTTGATCTCCTCCCGCCCTCCCCGGAGAGTCTCACCCTTAAGCCTCATCGCTCCTCCGACTTCGCCTACTCCGCCATACGCTCCGCCACATTCCGTCGCAAGGCCGCTCTGACCTTCCGCGACTTCCACCTTCTCCGTCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAACCGGCAATTCAACAGCCCCGGAGAAGACGAGGAGGATGAGGCGTGCTGTTTGTACGCGATGAAGGTGGTGGACAAAGACGTAGTGGCATTGAAGAAGAAGTCGCAGAGAGCGGAAATGGAGAGGAAAATCCTGAAGATGCTGGACCACCCGTTCCTCCCTACTCTCTACGCGGAGTTCGAAGCCTCTCATTTCTCTTGCATCGTGATGGAGTTTTGCTCCGGTGGAGACCTTCACACGCTGCGCTTCAAGCACCCTCACAACCGTTTCCCTCTCTCCTCAGCTAGATTTTATGCCGCGGAGGTGCTGGTGGCGTTGGAGTACCTCCACATGCTGGGAATCATATACAGAGATTTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCGGATTTCGATCTCTCCCTTTGCTCAGACGCAATCCCAGCCGTTGAATCCTCAGATTCCTTGCACCTTCCATCTCCAAATCCATTACCTTACACTTGCACTCACAGTCACACTCCCACTCACCCTCGCTCGCATTCTTTTATCAGCCCATTCTCCTGCTTCTCCAACCGGGGTTTACGGTCTCATGACATGCGAGCCGTCGAACCGAACCTGCTCTTCGTGGCCGAACCGGTTTCTGCCCGCTCCTGCTCCTTCGTCGGAACCCACGAGTACGTCTCGCCTGAGGTTGCCTCCGGCAAGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTTGGAGTATTTATCTACGAGCTTATATACGGTCGCACGCCGTATGCAGGTCCATCGAAGGAGGCTACGCTGCGGAACATCGTAAAGAAGCCCCTGGCGTTCCCCACTGCCACGCCCGCGAGCTGTCTTGAACTCCACGCGCGGGATTTGATATCCGGCTTGCTGAACAAAGACCCGGCGCGTCGGCTAGGATCGAAGCGCGGCGCTGCTGACGTCAAGAAGCACCCATTCTTCAGAGGGCTTAACCTGGCGCTGATTCGCATGCAGACGCCGCCCCAAGTGCCTGGCTCGAGAAGGACTAAAACGACGTCGCTGTACCCTGTCAAGGGTGACAGAAACAACAACCATCATAAACAGCAACAGACGGCGTCGTTTGATTTTTTCTTTTGA 1434 0.5586 MLETGGGGERHSEASSETLNSSMLGSSMSSESICSTSFSRLSFDLLPPSPESLTLKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRNRQFNSPGEDEEDEACCLYAMKVVDKDVVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHTLRFKHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDSLHLPSPNPLPYTCTHSHTPTHPRSHSFISPFSCFSNRGLRSHDMRAVEPNLLFVAEPVSARSCSFVGTHEYVSPEVASGKSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPASCLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFRGLNLALIRMQTPPQVPGSRRTKTTSLYPVKGDRNNNHHKQQQTASFDFFF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02869 477 MobiDBLite consensus disorder prediction 453 477 - -
Phco4g02869 477 FunFam serine/threonine-protein kinase D6PK-like 318 444 - -
Phco4g02869 477 SUPERFAMILY Protein kinase-like (PK-like) 65 446 IPR011009 -
Phco4g02869 477 Gene3D Transferase(Phosphotransferase) domain 1 319 444 - -
Phco4g02869 477 FunFam protein kinase PINOID 2 82 176 - -
Phco4g02869 477 SMART serkin_6 84 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02869 477 Gene3D Phosphorylase Kinase; domain 1 82 176 - -
Phco4g02869 477 FunFam protein kinase PINOID 177 245 - -
Phco4g02869 477 MobiDBLite consensus disorder prediction 1 24 - -
Phco4g02869 477 PANTHER FLIPPASE KINASE 1-RELATED 26 449 - -
Phco4g02869 477 Gene3D Transferase(Phosphotransferase) domain 1 177 244 - -
Phco4g02869 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Phco4g02869 477 Pfam Protein kinase domain 84 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02869 477 Pfam Protein kinase domain 320 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02869 477 ProSiteProfiles Protein kinase domain profile. 84 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02869 Phco-Chr4 49978052 49979578 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco4g02869 Pkinase 5.6e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02869 4 49978052 49979578 Phco4g02869 4 49978052 49979578 ECH