Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02837 ATGAACATCAAACAAAAAAAGTATGCATCTTATGATCCCAACTACATTGATAGAAACAAAATATTCAACTTCATCGAACTCATCAATATGGAATCCATTTTTGTGGTTTTGATATTTTTGGTAGCATCAAATCCAAGCTCAGCAACACCCTCTCCCTCTCCTTCTCCCACCATTTCACCTATTAACAGTTCTACATGCCCAGTGGCCATGAATTTTGTTCAAACAGTCCCTTGGAACATCTCTTCCTGCCATAACTTCCAACCCTTGGCTTCCCAATACCAAACAAGCACAAGTCTTTGTTGCCAAACTCTCCTATCCCTCTTTGGTGTAGCTCTTGCACAAAACCTCAAGGATAACTCTCTTTTCCAACTCGCCAACCTCCCCACATCTATTTCTTGCCTCCAACACTTCCAATCCAATCTCACATCCCTCTCACTTCCCAACAATCTTGTTTCCTCCTGCTTTGATCCACAACAATTTGTCATCACTCCTGACATCTGTGCTCGGATTCAAAACATGGAAGATTGGCTCACCAGGCTTGGCTCTACACCACAGCTCGACACTGCGTGTAAACCAGATCTTAGTGATAAAAACCAATGCAACAAGTGCGTGGCTGAGGGGTACAAGGTTCAGCAGAAGCTTAGTGCCATTGATGGTAATGAATCACATTCCCAAGATTGCTTTTACTTCACAGCACTTTACATGGCTGGAGTTGCCAATGAGTATGGCCCTGAGAGCAGAGGTGCTTTGTCTTGCGTTTTGATTTTGATGGTTAATTCACAGGTTGATTCAAGGGATGGCCATCGTGCTCTTATGCTTGGTTTGTTTGTAGCTTCACTTGCAGTCCTGGTAATCGTGTTGTTAGGATTAGGGTTGTATTTTTGGTACACCAAGAGAAGAAGTGTTGAAAATTTGCTTGCCTATGCTGAACTACAGGAACAAAGGTTCAGGCTAAGGCTGAGACCAAATACAGTGTTAACTTGGTTTGAAATTGAGAGTCTTGTGAGGGCCACCAACAATTTTTCACCTCGGAACTTAATTGGCAGAGGTGGGTTTGGGATGGTTTACAAGGGCATTCTACCTGATGGCACAATGGTTGCGGTGAAAAGGCTTCAAGAATCCGATTCTCAAGGAGATGCTCTGTTCTACAGTGAGATTGAGATTGTTAGCAACTTGAAGCACCGTAATCTGGTGCCACTAAGAGGGTGTTGTGTGGTTGATGAGAATCACAATCTTGAGTACAGAGGCAGATATCTAGTTCATGAATATATGCCAAATGGAAGCCTTCAAGACCATCTTTTTCCAACCAAGTTAGACAATCAATATACAAAGAAATCCCTGACTTGGACTCAAAGAAAAGGCATAATCTTGGATGTGGCAAATGCATTGGTTTATTTGCACTTTGGAGTTAAACCTGCAGTATATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCGAGGGTTGGAGATTTTGGGCTAGTCAAACTGAGCAGTAAAAGTACGTCTCATCTAAATACAATGGTAGTTGGAACTCGTGGATATGTAGCACCTGAATATGCACTCTATGGTCAGCTAACTGAGAAGAGTGACGTCTACAGCTTTGGTGTGGTTGTTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAGTTGTCTTCATCAGGAACACCAGTTTTCTTGATCACAGATTGGGTTTGGTCATTAATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATGTTAGGAGATGGAAATTGTGCTAGAAACATAATGGAGAGGTTTTTGCTGGTCGGAATTCTTTCTTCTCATGTAATGGTTGCTTCAAGGCCAACAACTTTGAATGCCTTGAAGATGTTAGAAGGGGATATAGAGGTCCCACCAATTCCAGACAGGCCACTGATGCATGGGCACTATGTGATGTATGATGGTGATTGCTCTGGGATGAGCTCAGGATGTGGGTTTGTGAGCTCATGA 1995 0.4256 MNIKQKKYASYDPNYIDRNKIFNFIELINMESIFVVLIFLVASNPSSATPSPSPSPTISPINSSTCPVAMNFVQTVPWNISSCHNFQPLASQYQTSTSLCCQTLLSLFGVALAQNLKDNSLFQLANLPTSISCLQHFQSNLTSLSLPNNLVSSCFDPQQFVITPDICARIQNMEDWLTRLGSTPQLDTACKPDLSDKNQCNKCVAEGYKVQQKLSAIDGNESHSQDCFYFTALYMAGVANEYGPESRGALSCVLILMVNSQVDSRDGHRALMLGLFVASLAVLVIVLLGLGLYFWYTKRRSVENLLAYAELQEQRFRLRLRPNTVLTWFEIESLVRATNNFSPRNLIGRGGFGMVYKGILPDGTMVAVKRLQESDSQGDALFYSEIEIVSNLKHRNLVPLRGCCVVDENHNLEYRGRYLVHEYMPNGSLQDHLFPTKLDNQYTKKSLTWTQRKGIILDVANALVYLHFGVKPAVYHRDIKATNILLDADMRARVGDFGLVKLSSKSTSHLNTMVVGTRGYVAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALELSSSGTPVFLITDWVWSLMKSGNIGEALDASMLGDGNCARNIMERFLLVGILSSHVMVASRPTTLNALKMLEGDIEVPPIPDRPLMHGHYVMYDGDCSGMSSGCGFVSS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02837 664 SMART serkin_6 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02837 664 Gene3D Phosphorylase Kinase; domain 1 304 423 - -
Phco4g02837 664 Pfam Protein kinase domain 345 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02837 664 SUPERFAMILY Protein kinase-like (PK-like) 321 626 IPR011009 -
Phco4g02837 664 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Phco4g02837 664 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 424 634 - -
Phco4g02837 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 78 643 - -
Phco4g02837 664 Pfam SPARK 62 228 IPR043891 -
Phco4g02837 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Phco4g02837 664 FunFam Receptor-like serine/threonine-protein kinase At4g25390 306 423 - -
Phco4g02837 664 Gene3D Transferase(Phosphotransferase) domain 1 424 632 - -
Phco4g02837 664 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02837 Phco-Chr4 49693868 49695862 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco4g02837 Pkinase 7.1e-42 CL0016