Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02835 ATGGAGAAGTACGAGGTGGTTGAAGAGAACGTAGGGTATGGGAGATTCGCAATGGTGAAACTTATGCGTCACAGAGAGACCAAACACCTCGTTGCTGTCAAATTCATCCCAAGGGACCATATGATTAACGAGAAGGTGGCAAGGGAAATCATAAACCATAGATCTCTTCGTCATCCCAATATTGTTCAGTTCATAGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCTGGTGGAGAGTTGTTTTACGAAGTTCTTAACGTAGGAACAATGACAGAAGATCGAGCTCGATATTTCTTCCAGCAGTTGATAGCAGGAGTTAGTTATTGCCACGACATGGAAATATGTCATCGAGACCTGAAGTTGGAGAATACCTTATTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCATATCTACTTCATTCGAGGACTCATTCAATGGTAGGAACTCCAGCCTATATTGCACCAGAGATCCTTTCTGGGAAAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTTATACTTTATACAATGCTTGTAGGAACTTTGCCATTTGAGGACAAAGCTGATCGTCAAAATCTCCGAAAAATCGTTCAGCGAGTTTCGGTTGTTCAATACGAGTTCCCCGACAATGTTTTATGCGAAGACAGTAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCAGCAAAGAGAATCACCATGAAGGAAATAAAGTCACATCCATGGTTTTTAAAGAAATTGCCGGAGGAGTTAAGAGAAGAAGCTCACTATATCTACTACAATGAAGAAAATACAAAACATTGTCTTCAAAGTATAGAAGAGATCATGAACATTGTCAACGAAGCCAAAACCACACCTGTTGCTTCGAGTCCAAATTTATAG 933 0.4009 MEKYEVVEENVGYGRFAMVKLMRHRETKHLVAVKFIPRDHMINEKVAREIINHRSLRHPNIVQFIEVALTPTHLAIVMEYAAGGELFYEVLNVGTMTEDRARYFFQQLIAGVSYCHDMEICHRDLKLENTLLDGSPANRLKICDFGYSKSYLLHSRTHSMVGTPAYIAPEILSGKEYDGKLADVWSCGVILYTMLVGTLPFEDKADRQNLRKIVQRVSVVQYEFPDNVLCEDSKNLISRIFVANPAKRITMKEIKSHPWFLKKLPEELREEAHYIYYNEENTKHCLQSIEEIMNIVNEAKTTPVASSPNL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02835 310 FunFam Serine/threonine-protein kinase SRK2A 81 268 - -
Phco4g02835 310 SUPERFAMILY Protein kinase-like (PK-like) 8 294 IPR011009 -
Phco4g02835 310 Pfam Protein kinase domain 7 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02835 310 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Phco4g02835 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Phco4g02835 310 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Phco4g02835 310 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02835 310 PANTHER SERINE/THREONINE KINASE 2 287 - -
Phco4g02835 310 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02835 Phco-Chr4 49679178 49683535 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phco4g02835 Pkinase 2.5e-69 CL0016