Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02814 ATGGGTAATTGCTGGTGTAGATGGGAGTCATCAGATTATAGAGTCTCATCCAATGTAAAGTCAGAACAAAACCAGGTAACCAAGCAAAGGAATGATTATGATAGTAAGTTACCATCAAACCCTGAGGAAGTAGAAGACCTCCGCCGTGACTCAGCTGCAAATCCATTGATTGTATTCACTTATGATGAGTTGAAGACAATCACTGCAAATTTTAGGCCAGATCGTGTGTTGGGGGGAGGTGGATTTGGAAGTGTGTACAAAGGGTTTATTTCTGAGGAGTTAAGGCAGGGTCTTCCTACCCTTGCTGTTGCTGTTAAGGTTCATGATGGTGACAATAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTCAAATTAGTTGGATACTGCTGCGAGGATGAACATAGGGTACTAATATATGAGTACATGTCCCGGGGAAGTGTGGAGCACAACTTGTTCTCAAAAATCTTGCTTCCCCTGCCATGGTCCACAAGAATGAAGATTGCATTTGGTGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGTGATTTCAAGACATCAAATATTTTATTGGACCAGGACTACAATGCAAAACTTTCTGATTTTGGCCTTGCTAAGGATGGACCAGTTGGAGACAAATCACATGTTTCTACTCGAGTAATGGGAACATATGGTTATGCAGCACCTGAATACATAATGACAGGTCATCTGACTCCTAGAAGTGATGTTTATAGTTTTGGGGTTGTTCTTCTTGAACTTCTCACGGGAAGAAAATCTTTAGACAAGTTAAGACCTGCTAGAGAGCAGAACCTCACAGAATGGGCTATTCCTTTGCTTAAGGAAAAGAAGAAATTTCTAAACATAATAGATCCAAGGTTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTTCATATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTCTGATGCGAGATATTGTGGACTCATTGGAGCCTTTGCAGGCACACACAGAGGTCCCTAAAACACTGACCATAATCAGTGATGTTCCTGAATCTGGTTTGAAAATGAAAGATGCAAAATGA 1140 0.4158 MGNCWCRWESSDYRVSSNVKSEQNQVTKQRNDYDSKLPSNPEEVEDLRRDSAANPLIVFTYDELKTITANFRPDRVLGGGGFGSVYKGFISEELRQGLPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLVGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPLPWSTRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQDYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLTEWAIPLLKEKKKFLNIIDPRLDGDYPIKAVHKAAMLSYHCLNRNPKARPLMRDIVDSLEPLQAHTEVPKTLTIISDVPESGLKMKDAK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02814 379 PANTHER OS01G0588500 PROTEIN-RELATED 29 353 - -
Phco4g02814 379 CDD STKc_IRAK 77 352 - -
Phco4g02814 379 FunFam Serine/threonine-protein kinase BIK1 38 154 - -
Phco4g02814 379 MobiDBLite consensus disorder prediction 17 34 - -
Phco4g02814 379 Gene3D Phosphorylase Kinase; domain 1 33 154 - -
Phco4g02814 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Phco4g02814 379 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Phco4g02814 379 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Phco4g02814 379 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Phco4g02814 379 FunFam Probable serine/threonine-protein kinase PBL8 155 367 - -
Phco4g02814 379 SUPERFAMILY Protein kinase-like (PK-like) 43 349 IPR011009 -
Phco4g02814 379 MobiDBLite consensus disorder prediction 17 46 - -
Phco4g02814 379 ProSiteProfiles Protein kinase domain profile. 71 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02814 Phco-Chr4 49473869 49478947 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco4g02814 PK_Tyr_Ser-Thr 3e-46 CL0016