Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02765 ATGGTACCTAGGACACTCTTTGCTTTCTTACTCTTTACTCTGAGTTGTTTCAGATGGCTAGAATATGCAGAATGCAAACTACCCCAAGAGGAGGTTGAAGCTCTTAAGGAAATCATTAGCACGATGGGGGGCACCTCTTGGGAGTTTGATAGTGATTATTGTCCTATTAAAATGCTGAGATCAACACCAGTTCCACCTATAGAATCTGAAAGGAGAATTGAGTGTGGTTACTGTGTTGAAAATAACACTTGTCATGTAGTACTGATCAAGTTCAAGTCGGTCAACCTTCCTGGCATGCTTCCACCTCAATTGGTTAAGCTTCCTTACCTCAAAACAGTTGATTTTGCTTTGAACTACCTAAGTGGTACGATTCCAAAGGAATGGGGTTCAACGAGATTAACTTCAATCTCTCTATTTTTTAATCATCTGTCAGGGGAAATTCCTATAGAGTTGGGAAGAATCACCACTCTAACCTACCTGAACCTTGAAGGAAACCAATTTTCTGGTGTTGTTCCCCATGAACTTGGAAGTCTATTTCACCTGGAAAATTTGATTTTATCGTCCAATAAATTGTCTGGGAACTTACCGGTGACACTTGCTAAGTTGCAGAATTTGAGAGATTTCAGGATAAGTGATAACAATTTTAACGGAGAAATACCTAGCTTCCTCATACAGAGTTGGAAATTACTTCAAAGATTAGACATGCTTGCAAGTGGACTGGAGGGACCTATCCCATCAAATATATCTCTTTTGAGTAATTTAACTCAATTGAAGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCCAATTTAAGAAGCCTGAACAGAATAGAGACACTGATTTTGAGAAACTGCCATATTACTGGAGAGCTTCCTAGCTACTTGTGGAGTATGCAGTTCTTGATTATGTTGGACGTGAGTTTCAATAAGTTGGTTGGGAAAATACCAGATGCTAAACATGCAGGGCATCTGAGATTTCTCTTCCTAACTCACAACATGCTAAGTGGTAATCTTCCCAAGTCGGTCTTGATGGATGGAAGCAGCGTTGACCTTTCTTACAACAATATTACCTGGCAAGGACCAGATCAACATGCTTGTAGAGATGACCTAAATTTAAACATAAACTTGTTTAGGAGCTTCTTCGGGACCAAATTACGGGAGATTCTTCCATGTTTAAATATCTCCAATTGTCCTGCATATTCACATTGTTTTCATGTTAATTGTGGTGGAAAGGATTTAAAGGAGATGGACAGTGGTGAAAATGTTCTCTATGTAGGAGATGGAGATTCGTTAGGTAGTGATGCTGCTAAATATTTTATTAATAATACAAATCACTGGGGATTTAGCAGCACTGGGGACTTCATGGATGATGGCAATTACCTAAATGCTCGTTACACTAGGGCTTGGCCATCTTCAAATTTGCCTGAATTATATAAAACGGCTCGTGTTACTCCACTTTCGCTTACTTATTTTCTCTATTGCTTGGAAAATGGGAAATATACTGTAAAACTCCACTTCGCAGAAATACAATTTAGAAATGATAAGACGTATAGAAGTCTTGGGAAGCGCTTATTTGATATTTATATTCAGGAAAAATTAGTTAGGAAGGATTTTAATATTGAAGATGAAATTCATGGTGCTGAAAAACCACTTACGTTCCCATATAATGTCAGTGTAACAGACAATTTTCTGGAGATTCGATTCTATTGGGCTGGAAAGGGCACTACAAGGATTCCTGTTGGTGGAGTTTATGGTCCCCTCATATCAGCTCTCTCAATTGTTTCTCATTCCAAACCTTGTTCAGAACAAAAAAGTGCAAGGCATACGATCATTGTTGGAGTTGGGTTTGGTATTACAGCTCTGTGCCTTGTCTTTATCATTGTTATTGGAATCTTTTGGTGGAAGAACTGCTTCAAAGGAATAATTAGGAGAATAAAAGGTACTGAAAGACAAGATTCTCAAATGGGGTCATTTACATTAGAACAAATTAGAGAGGCCACAGAGGATTTCAGTCCAGTTAACAAGATTGGAGAAGGTGGTTTTGGTCCGGTCTACAAGGGTCAATTATCTGATGGTACATTGGTAGCAGTCAAACAACTCTCATCAAAGTCACGGCAAGGAAATCGTGAATTTTTAAACGAGATAGGCCTAATATCTCTTTTGCAACACCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGGATCAATTGATGTTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCGTGCTTTATTCAGCTCAAAAGATCAACTTAAACTTGATTGGCCAACAAGGCTTAGGATCTGTATTGGCTTAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAAGACTCAAGATTGTTCATCGAGACATTAAAGCAACTAATGTGTTACTGGATGGGGATTTAAACCCTAAAATATCTGACTTTGGGTTGGCTAGGCTTGATGAAGAAGAGAAGTCCCATATCACCACCCGAATAGCTGGGACAATAGGGTACATGGCACCGGAATATGCATTATGGGGTCACTTGTCTTACAAGGCTGATGTTTACAGTTATGGGGTTGTGGTCTTGGAAGTTGTTAGTGGGAAGTGCAATCAGAATTACATGCCTAGTGATAATTGTGTTTGCCTTTTAGATAAGGCATGTCATCTACAGCGTACTGAAAACTTAATAGAACTGGTAGATGAAAGGTTGGGATCAGAGCTAAAACCAACTGAAGCAACAATTTTGGTGAAAGTAGCTCTTCTGTGCACTCATGTATCACCTTCGCTTAGGCCTACAATGTCTGAGGTTGTAAACATGCTCGAAGGAAGAGCAAGCATTCCAGATGCTATCCCACAGCCAAGTGACTTTAGTGAAGATTTAAGGTTTAAATCCATTAGGGATATCTTCCAACAAAGAGAAAATCACAGTTTAAGTTCAAGCCAATTAGAAAATTCAACAGGAGTCCTTACACTTAGCTCACCCTAA 2988 0.3899 MVPRTLFAFLLFTLSCFRWLEYAECKLPQEEVEALKEIISTMGGTSWEFDSDYCPIKMLRSTPVPPIESERRIECGYCVENNTCHVVLIKFKSVNLPGMLPPQLVKLPYLKTVDFALNYLSGTIPKEWGSTRLTSISLFFNHLSGEIPIELGRITTLTYLNLEGNQFSGVVPHELGSLFHLENLILSSNKLSGNLPVTLAKLQNLRDFRISDNNFNGEIPSFLIQSWKLLQRLDMLASGLEGPIPSNISLLSNLTQLKISDINGPSQDFPNLRSLNRIETLILRNCHITGELPSYLWSMQFLIMLDVSFNKLVGKIPDAKHAGHLRFLFLTHNMLSGNLPKSVLMDGSSVDLSYNNITWQGPDQHACRDDLNLNINLFRSFFGTKLREILPCLNISNCPAYSHCFHVNCGGKDLKEMDSGENVLYVGDGDSLGSDAAKYFINNTNHWGFSSTGDFMDDGNYLNARYTRAWPSSNLPELYKTARVTPLSLTYFLYCLENGKYTVKLHFAEIQFRNDKTYRSLGKRLFDIYIQEKLVRKDFNIEDEIHGAEKPLTFPYNVSVTDNFLEIRFYWAGKGTTRIPVGGVYGPLISALSIVSHSKPCSEQKSARHTIIVGVGFGITALCLVFIIVIGIFWWKNCFKGIIRRIKGTERQDSQMGSFTLEQIREATEDFSPVNKIGEGGFGPVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGLISLLQHPNLVKLHGCCIEGDQLMLVYEYMENNSLARALFSSKDQLKLDWPTRLRICIGLAKGLAFLHEESRLKIVHRDIKATNVLLDGDLNPKISDFGLARLDEEEKSHITTRIAGTIGYMAPEYALWGHLSYKADVYSYGVVVLEVVSGKCNQNYMPSDNCVCLLDKACHLQRTENLIELVDERLGSELKPTEATILVKVALLCTHVSPSLRPTMSEVVNMLEGRASIPDAIPQPSDFSEDLRFKSIRDIFQQRENHSLSSSQLENSTGVLTLSSP 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02765 995 FunFam Putative LRR receptor-like serine/threonine-protein kinase 747 953 - -
Phco4g02765 995 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 196 263 - -
Phco4g02765 995 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 195 - -
Phco4g02765 995 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 642 746 - -
Phco4g02765 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 977 - -
Phco4g02765 995 CDD STKc_IRAK 677 943 - -
Phco4g02765 995 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Phco4g02765 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Phco4g02765 995 Gene3D Ribonuclease Inhibitor 44 196 IPR032675 -
Phco4g02765 995 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Phco4g02765 995 Pfam Malectin domain 404 592 IPR021720 -
Phco4g02765 995 ProSiteProfiles Protein kinase domain profile. 671 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02765 995 SMART serkin_6 671 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02765 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 597 - -
Phco4g02765 995 Gene3D Phosphorylase Kinase; domain 1 640 746 - -
Phco4g02765 995 Pfam Protein tyrosine and serine/threonine kinase 675 941 IPR001245 GO:0004672|GO:0006468
Phco4g02765 995 Gene3D - 402 599 - -
Phco4g02765 995 Gene3D Transferase(Phosphotransferase) domain 1 747 950 - -
Phco4g02765 995 SUPERFAMILY L domain-like 77 340 - -
Phco4g02765 995 Gene3D Ribonuclease Inhibitor 265 378 IPR032675 -
Phco4g02765 995 Gene3D Ribonuclease Inhibitor 197 264 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02765 Phco-Chr4 48984449 48997790 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco4g02765 PK_Tyr_Ser-Thr 1.8e-48 CL0016