Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02743 ATGGATAGTAAACTCACCAACAACAACCGTCACTCCTACATCAACCAACAAGAAGACTCTGATCCACCGCAAGAAAACATTGCCGACTCCCCTCCTTCTTCCTCTCTCTTCAACATCGATGCCGTTGTCACCTCCCCCACTTCCTCATCAACATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTAGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAGCACGCCACCATCGGATTCATGGGCGTGGAGAAAGTACGGGCAGAAACCCATCAAGGGTTCACCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGCCCGGCACGGAAACAAGTAGAAAGGAGCTGCCTGGACCCCACAATGTTGGTCGTCACTTATTCCTCCGACCACAACCATCCCTGGCCAGCTTCTAGAAACAACACCAGGCCCACAAAGAAGCCCGAGCCCGAACCAGTAACGGACCCGGTCGAACCGGAGCCAGAACCGGAGGAGAAGTTTGCGGAACTGGGCGGGGACGAATCGATGATCACCACCGCGGATGAGATGGGGTGGCTGGGGGAGATGGAGACAACGACGTCCACCGTTCTCGAAAGCCCCATTATGTCCGCAGGGTACCATGCTGACGTGGAGTCGGCGTTGCTGCCGATGAGGGAAGAGGACGAGCTGCTCTTCGCCGACCTCGGGGAGCTGCCGGAGTGCTCTGTCATGTTTCGGCAGGGGCTACTGGAGGAGAGGCGGCGGTACACGGCGCCGTGGTGCGGGACCACAAGTTGA 801 0.5643 MDSKLTNNNRHSYINQQEDSDPPQENIADSPPSSSLFNIDAVVTSPTSSSTSKRRRAIQKRVVQIPIKETEGCRLKGESSTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCLDPTMLVVTYSSDHNHPWPASRNNTRPTKKPEPEPVTDPVEPEPEPEEKFAELGGDESMITTADEMGWLGEMETTTSTVLESPIMSAGYHADVESALLPMREEDELLFADLGELPECSVMFRQGLLEERRRYTAPWCGTTS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02743 266 MobiDBLite consensus disorder prediction 73 94 - -
Phco4g02743 266 ProSiteProfiles WRKY domain profile. 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02743 266 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 244 IPR044810 GO:0003700
Phco4g02743 266 SUPERFAMILY WRKY DNA-binding domain 81 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g02743 266 MobiDBLite consensus disorder prediction 1 61 - -
Phco4g02743 266 MobiDBLite consensus disorder prediction 137 151 - -
Phco4g02743 266 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02743 266 MobiDBLite consensus disorder prediction 1 53 - -
Phco4g02743 266 Pfam WRKY DNA -binding domain 85 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco4g02743 266 MobiDBLite consensus disorder prediction 152 174 - -
Phco4g02743 266 FunFam WRKY transcription factor 65 60 144 - -
Phco4g02743 266 Gene3D WRKY domain 72 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco4g02743 266 MobiDBLite consensus disorder prediction 137 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02743 Phco-Chr4 48823331 48824649 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco4g02743 WRKY 6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02743 4 48823331 48824649 Phco4g02743 4 48823331 48824649 ECH