Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02722 ATGGAAAACATATGGGACCCATATGGTTTATGGCTCAAAATTTATGTTGGATTGATTTCTCTATGGGGAGCTCAACAGTGTTTGTCTCTGAATGATGAAGGATTATCCTTGTTGGAATTTCGGGGAAGAATAACTTCTGATCCTTTTCATGCTCTGGCAAATTGGAATCCAAATGATTGTAACCCTTGCCAGTGGTTTGGTGTTCGTTGTGTAGATGGTAAAGTGCGAATGCTGATCCTACCTGCTCTCTCTTTGGAAGGCACGTTGGCTCCTGAGCTTGGGAAACTTAGTCATCTAAAATCCCTTGTATTATACAAGAACAGTTTTGCTGGTACTATTCCCAACGAACTTGGTGATCTAGACAAGCTGGAGTTATTGGATCTAAGGGGGAATAACATGAATGGATGTGTCCCAGCAAAAATTGGCCAGATGTTGTTGTCAGAACAATTGTTAATTTGTGACAAGAAATGTGAAGACAGTGAAGAGATTGGAAATATCAGATTGCCCTGTAATATCAATCGTTCAACTCCTTTGACAACTTTATCACGTGGCAAGAACAGAAAGGTTGCACCCAGAAATTTCAAGCAATTGAATGAGGCAGATTCATCTTCTATTCCACTTAAAGGAGCGCTAAAAAAACACATCAATGCTGTCATTGCTGTCGCACTGCCATTGTTCAAGCTAGGAAAGGCCTCCCCTCATGCCCATGCAGAGAAATGGTGTGACATTCGGACTAGCTCTGATGATTCAGAGATTGGCCAGAATGTAGCAAATCTGGTCAATTCAGCACGACGCAGGCTGCTTGATCAGTCCAGTAACCTTGCAGCTGTACCTTTCAGTGGTGGGCCTACTATACAGATGAGTTCTATTCCAATTACCCAGAGCAGTGGAGCTTTTCCCGCTTTCCCAGACACCAATAAGAAGCAAAATCTGTCACCTGCACAATTACCTTCACCTTCTAATTTTCCATCTATTAATCAAACAAGTCAACAAAATCCAGCTAATGTTGCTTCTGGAAAATTATGGGAGTATATTATTATAATAGCAGGTGTATCTGTCTTGGTCATTATTGTTTTGATCATGCTTTGCATTTGGAGAAAACGAGCAGCAAAAGTAATAAAGCCATGGAAGACAGGAATAAGTGGACAGCTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCAGGCAGAGCTGGAGACAGCCTGTGAAGACTTCAGTAATATTATAAATAGTTTTGATGAATGCACCATATATAAGGGAACACTCTCCAGTGGAGTCGAGATTGCTGTTGATTCAACTATTGTTACTTCAGCCCGTGATTGGTCAAAGAACATGGAGACAGCCTATCGCAAAAAGATTGCTACATTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGGTACTGCGATGAAGAACAACCATTCACCAGAATGATGGTATTTGAGTATGCTCCGAATGGAAGCTTATTTGAGCATCTGCACGTTAAGGAAGTTGAACATCTTGACTGGAGTGCAAGAATGAGAGTTATTATGGGCACGGCATATTGTCTTCAGTATATGCACCATGATCTGAATCCACCAGTAGCTCATTCCAACCTCAATTCAGTTGCTATATTATTGACAGATGACTTTGCTGCTAAAATATCAGAAATCGCTTTTGGCAAGAGTGTACTTTCACAAGCCAACACACCTGGACATGAGTCACAGAAATCTGACTTGCCACCCCAGGCTGATCCTGAAACCGATGTATATAACTTTGGAGTGTTGTTGCTTGAAATCATTTCCGGAAAACTACCATACTCTGAAGAACATGGCCACCTTGCCAACTGGGCTGTTGAGCACTTGAATGATAAGCAAAGCATCAGCAATCTGATCGATCCCTCGCTGGAGTCCTTCAAAGAAGAACAACTTGATGTCATCTGTGAGGTGGTCAAAGATTGTCTTCAATTTGATGCAAGGCTAAGACCAACAATGAAGGACTTAGCCCCCAGATTGAGGGAAGTGCTTCATGTATCACCTGAGCAAGCTGTTCCAAGACTCTCTCCTCTCTGGTGGGCTGAACTGGAGATCTTATCATTGGAGACCACTTAA 2103 0.4189 MENIWDPYGLWLKIYVGLISLWGAQQCLSLNDEGLSLLEFRGRITSDPFHALANWNPNDCNPCQWFGVRCVDGKVRMLILPALSLEGTLAPELGKLSHLKSLVLYKNSFAGTIPNELGDLDKLELLDLRGNNMNGCVPAKIGQMLLSEQLLICDKKCEDSEEIGNIRLPCNINRSTPLTTLSRGKNRKVAPRNFKQLNEADSSSIPLKGALKKHINAVIAVALPLFKLGKASPHAHAEKWCDIRTSSDDSEIGQNVANLVNSARRRLLDQSSNLAAVPFSGGPTIQMSSIPITQSSGAFPAFPDTNKKQNLSPAQLPSPSNFPSINQTSQQNPANVASGKLWEYIIIIAGVSVLVIIVLIMLCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNQAELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVTSARDWSKNMETAYRKKIATLSRVNHKNFTNLIGYCDEEQPFTRMMVFEYAPNGSLFEHLHVKEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPVAHSNLNSVAILLTDDFAAKISEIAFGKSVLSQANTPGHESQKSDLPPQADPETDVYNFGVLLLEIISGKLPYSEEHGHLANWAVEHLNDKQSISNLIDPSLESFKEEQLDVICEVVKDCLQFDARLRPTMKDLAPRLREVLHVSPEQAVPRLSPLWWAELEILSLETT 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02722 700 MobiDBLite consensus disorder prediction 309 329 - -
Phco4g02722 700 Pfam Protein tyrosine and serine/threonine kinase 418 668 IPR001245 GO:0004672|GO:0006468
Phco4g02722 700 PANTHER PROTEIN MALE DISCOVERER 2 19 697 - -
Phco4g02722 700 Gene3D Phosphorylase Kinase; domain 1 376 487 - -
Phco4g02722 700 Gene3D Transferase(Phosphotransferase) domain 1 488 681 - -
Phco4g02722 700 SUPERFAMILY L domain-like 31 191 - -
Phco4g02722 700 SUPERFAMILY Protein kinase-like (PK-like) 394 668 IPR011009 -
Phco4g02722 700 FunFam Inactive receptor-like serine/threonine-protein kinase 379 487 - -
Phco4g02722 700 ProSiteProfiles Protein kinase domain profile. 370 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02722 700 FunFam Leucine-rich repeat receptor-like kinase 35 153 - -
Phco4g02722 700 Gene3D Ribonuclease Inhibitor 35 152 IPR032675 -
Phco4g02722 700 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02722 Phco-Chr4 48594633 48600413 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco4g02722 PK_Tyr_Ser-Thr 7e-21 CL0016