Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02715 ATGGCCCAAGTACAGAGTGGGCAAGCCAGTGAAGGGATTAAGCTCTTTGGAACAACGATTACCTTGCATGGTAGAGAAAGAAGAGAAGATAATAAAGTGAGTGAAGATGAGACAGAAAAGAGACCAGAGAGGATCATACCGTGTCCAAGATGCAAGAGCATGGAAACCAAGTTTTGCTACTTCAACAACTACAACGTTAATCAGCCTAGGCATTTCTGCAAGGGCTGCCAGAGGTACTGGACTGCCGGCGGAGCCCTTCGCAACGTACCAATAGGGGCAGGTCGCCGAAAGGCCAAACCGCCGTCCCATGACCCTACAGGTTTTCTGGACGCTGGACTCGCATCCACGGTTCAACAACAATTTGGTTTGGAAGAGAGGTTGATCTTGGATGAATGGGATGTTGCCACCATCACTCACGGTGATTTCCGGCAGTTTTTTCCGTCGAAAAGGCGGAGGATAAACTCAGGTGGTCAAGCTGAGCATGAAAGTCAAAACGAGTTTGTTATGAGGCAGGAAATCATAGAAGATCCGAATGAGAAAGAAACGAAGGAGGGTTTAAAAGGCAGAGACAATCTAAAGCTTATCTGA 588 0.4745 MAQVQSGQASEGIKLFGTTITLHGRERREDNKVSEDETEKRPERIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPSHDPTGFLDAGLASTVQQQFGLEERLILDEWDVATITHGDFRQFFPSKRRRINSGGQAEHESQNEFVMRQEIIEDPNEKETKEGLKGRDNLKLI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02715 195 MobiDBLite consensus disorder prediction 15 41 - -
Phco4g02715 195 MobiDBLite consensus disorder prediction 21 41 - -
Phco4g02715 195 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Phco4g02715 195 Pfam Dof domain, zinc finger 45 99 IPR003851 GO:0003677|GO:0006355
Phco4g02715 195 MobiDBLite consensus disorder prediction 175 195 - -
Phco4g02715 195 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Phco4g02715 195 PANTHER CYCLIC DOF FACTOR 2 30 107 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02715 Phco-Chr4 48495814 48497189 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco4g02715 zf-Dof 1.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02715 4 48495814 48497189 Phco4g02715 4 48495814 48497189 ECH