Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02707 ATGTCTTCTCCAGTAATCAGCGAGATTCTCCTCTCTGGCTTCACCATAAACTCTTCTCTAAGACGCAGGACACACTTGGTTCAATCTTTCTCAGTTGTTTTCCTCCACTGGTTCTACATTTATCAATCAATTATTGCACAAATAGCACGCATGGCTTCTCCCGGCGGAGCCTTTTCATCCGGATCCAGTTCTCTTCAAAACTCAGGGTCCGAGGGAGACCGAGGCATGGTGGATCAGAAGAAGAGGAAGAGAATGCAGTCGAACAGGGAATCGGCACGCAGATCGAGGATGAGGAAACAGCAGCACCTGGAAGGTTTGAGTGGCCAATTGGATGAGCTGAAAAAGGAGAACAATGAGATGAACAGGAACATAGGCATGACGACGCAGGTGTACCTGAAAGTGGAAGCTGAGAACGCGATTCTGAGGGCGCAGATGGCTGAACTCAGCAACAGATTGAACTCTCTGAACGAAATCATCGGTTTCATAAACTCCACGAACTACTTGGTGTGGGATGAGGCACAGGAGACTCAGATGTTCAATGATTGTGGCTTCATGGATGCTTGGAATGGAATGCCCCTCAATCAACCAATCATGGCTTCCGCTGACAATGACATCTTGATGATGTATTGA 630 0.4746 MSSPVISEILLSGFTINSSLRRRTHLVQSFSVVFLHWFYIYQSIIAQIARMASPGGAFSSGSSSLQNSGSEGDRGMVDQKKRKRMQSNRESARRSRMRKQQHLEGLSGQLDELKKENNEMNRNIGMTTQVYLKVEAENAILRAQMAELSNRLNSLNEIIGFINSTNYLVWDEAQETQMFNDCGFMDAWNGMPLNQPIMASADNDILMMY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02707 209 CDD bZIP_plant_GBF1 81 129 IPR045314 GO:0003700|GO:0006355
Phco4g02707 209 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 124 IPR004827 GO:0003700|GO:0006355
Phco4g02707 209 SMART brlzneu 76 140 IPR004827 GO:0003700|GO:0006355
Phco4g02707 209 MobiDBLite consensus disorder prediction 74 101 - -
Phco4g02707 209 Pfam bZIP transcription factor 80 126 IPR004827 GO:0003700|GO:0006355
Phco4g02707 209 Coils Coil 96 158 - -
Phco4g02707 209 MobiDBLite consensus disorder prediction 59 112 - -
Phco4g02707 209 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Phco4g02707 209 MobiDBLite consensus disorder prediction 59 73 - -
Phco4g02707 209 PANTHER BZIP TRANSCRIPTION FACTOR 44 60 205 - -
Phco4g02707 209 Gene3D - 78 133 - -
Phco4g02707 209 FunFam BZIP transcription factor 78 129 - -
Phco4g02707 209 SUPERFAMILY Leucine zipper domain 80 132 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02707 Phco-Chr4 48427752 48428525 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco4g02707 bZIP_1 2.1e-10 CL0018