Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02706 ATGTTAACGTTAACGTGGAAAAGAGAAAGAGAAAGAGAAAGAAAAAGAAAAAGCAAGGCACGTTGTGATATTTTGCATTCTCTCTTGCGGCTAAAGCAAACCCAAACAGTAATAATACCACCAAAGAAAACCAATGCCGTGTGGTTTGGGTTCGTCCTCCTCACTCATCTGAATTTTGTGGGAATGGCAACTCTAGTTGAACCTCCGAACAGAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTACGTTCCAATCAAGCCTATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAATAGGGAGACCAATGAGAGAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTCTATTGATGCTTTGAGAACTTTAAGGGAACTGAAGCTGCTTAGACATATTCGGCATGAGAATGTCATTGCTTTGAAAGATGTTATGATGCCAATCCAGAGGACGAGTTTTAAGGATGTCTACTTGGTCTACGAACTCATGGATACCGATCTTCACCAAATTATTAAGTCCTCGCAGCCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTTCTTCGAGGTCTTAAATACCTTCATTCAGCAAATATTCTTCACCGGGATTTGAAGCCTGGGAATCTGCTCATAAATGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCACGAACTAATGGAGTTGATGGTCAGTTTATGACAGAATATGTTGTCACTCGTTGGTATCGTGCACCGGAGCTCTTGCTATGCTGTGACAACTACGGGACCTCTATTGATGTCTGGTCAGTAGGGTGCATCTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGCACTGAGTGTCTCAACCAGCTGAAACTAATTATAAGTGTTCTTGGAAGCCAGCATGAATCTCATATTGAGTTTATTGATAATGCAAAAGCCAGGAGGTTTATCAAATCACTGCCCTATACAAGGGGGAGACACTTCTCTCAGCTATATCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAAGATGCTTGTATTTGATCCAACCAAGAGAATTACAGTCTTAGAAGCACTCCAACACCCATATATGTCTGGCCTATATGATCCAAGGTGCAACCCTCCTGCTCAGGTTCCCATCAGTCTTGACATAGATGAACATTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTACATTATCACCCTGAAGCTGTTTCTGCCAATGCATAG 1290 0.4116 MLTLTWKRERERERKRKSKARCDILHSLLRLKQTQTVIIPPKKTNAVWFGFVLLTHLNFVGMATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNERVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESHIEFIDNAKARRFIKSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMSGLYDPRCNPPAQVPISLDIDEHWGEQMIREMMWNEMLHYHPEAVSANA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02706 429 SMART serkin_6 93 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02706 429 FunFam Mitogen-activated protein kinase 79 187 - -
Phco4g02706 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Phco4g02706 429 ProSitePatterns Protein kinases ATP-binding region signature. 99 123 IPR017441 GO:0005524
Phco4g02706 429 SUPERFAMILY Protein kinase-like (PK-like) 85 386 IPR011009 -
Phco4g02706 429 CDD STKc_TEY_MAPK 87 422 - -
Phco4g02706 429 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 92 381 - -
Phco4g02706 429 Pfam Protein kinase domain 94 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g02706 429 ProSitePatterns MAP kinase signature. 128 231 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phco4g02706 429 FunFam Mitogen-activated protein kinase 177 406 - -
Phco4g02706 429 Gene3D Phosphorylase Kinase; domain 1 80 416 - -
Phco4g02706 429 Gene3D Transferase(Phosphotransferase) domain 1 177 406 - -
Phco4g02706 429 ProSiteProfiles Protein kinase domain profile. 93 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02706 Phco-Chr4 48416805 48419901 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco4g02706 Pkinase 2.4e-69 CL0016