Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02634 ATGGAACAAGAAGAAGGGAGAGAGGAAAATACAAAAATTCAGCTTGCAGTTGCAGCACCAAAACCGCAGCACAAATGTCCTCGCTGCGATTCCACCAACACCAAGTTCTGCTACTTCAACAACTACAGTCTCTCACAGCCTCGTCACTTCTGCAAAACGTGTAAAAGGTACTGGACGCATGGTGGAACCTTCAGGAACATACCCGTTGGTGGTGCTTCCCGTAAAGCCAAACGTGGCAAAACAGATTCTTCACCTTCCCATTCACTCACACAACCACTGTCAAATTTGATGAAGCCTTCACCACTCACTATGGTTCACTCAACTAGCCCTTACTATCATCAACTTGGTGGTGGTGGTGGTGGAAGAGGGTATTTGTCATCTCTTGCAACGCTTCATTCTCAGACCACATCAAAGCCTTTCAATCAGTACCTCAATATTGCGGGTTCTCCTTCTAGTTTGCCTCTTCTCTCTGCCTTCAACGCTGCTGCTTCTTTTCCTCCTCGGTTCCATCACATGGGAACCAGAGAGAGGGTGGAATCTCTCTATCCTGCACCACAACGTTTGCTTCCATCAAACATGGCTAGTGGCAGTGCTGCTTCTGCCTCTGCTCATTGCCCACAAAGCTTGATTAATAATGTTTCAAGTACAAACCTTACGGCTGGTTCTGATGCCTCTTTGTGGAGTGCTACTATCAACGCCACTTCCATCGGTGGAAACTCTGATCAGAACAATGTCAAAGGTGGTCCTTCCTCTTTGATCCCAAATCATTGGCTTCATCTCTCAGGGTATCGTCCTCCTCAATAA 804 0.4689 MEQEEGREENTKIQLAVAAPKPQHKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCKRYWTHGGTFRNIPVGGASRKAKRGKTDSSPSHSLTQPLSNLMKPSPLTMVHSTSPYYHQLGGGGGGRGYLSSLATLHSQTTSKPFNQYLNIAGSPSSLPLLSAFNAAASFPPRFHHMGTRERVESLYPAPQRLLPSNMASGSAASASAHCPQSLINNVSSTNLTAGSDASLWSATINATSIGGNSDQNNVKGGPSSLIPNHWLHLSGYRPPQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02634 267 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 187 IPR045174 GO:0003700|GO:0006355
Phco4g02634 267 MobiDBLite consensus disorder prediction 83 99 - -
Phco4g02634 267 MobiDBLite consensus disorder prediction 68 99 - -
Phco4g02634 267 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Phco4g02634 267 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Phco4g02634 267 Pfam Dof domain, zinc finger 23 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02634 Phco-Chr4 47703751 47704554 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco4g02634 zf-Dof 9.9e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02634 4 47703751 47704554 Phco4g02634 4 47703751 47704554 ECH
Phco4g02634 4 47703751 47704554 Phco11g00427 11 2821058 2821975 PCT